Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RN7SL799P-201ENST00000475891 298 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 RPS27P20-201ENST00000492051 246 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AC025445.1-201ENST00000502728 300 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 NENFP3-201ENST00000503735 313 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1BO75841 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC100770.1-201ENST00000532310 322 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.33□□□□□ -1.72
UPK1BO75841 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC012616.1-201ENST00000600294 197 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AC023509.5-201ENST00000617434 807 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.33□□□□□ -1.72
UPK1BO75841 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC067931.1-201ENST00000624190 671 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.33□□□□□ -1.72
UPK1BO75841 AC008691.1-209ENST00000642094 814 ntBASIC4.33□□□□□ -1.72
UPK1BO75841 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.33□□□□□ -1.72
UPK1BO75841 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
UPK1BO75841 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPK1BO75841 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
UPK1BO75841 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1BO75841 TTC39DP-201ENST00000416781 1688 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 HSPD1P14-201ENST00000432666 1618 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
UPK1BO75841 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UPK1BO75841 AL049869.1-201ENST00000556933 1402 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
UPK1BO75841 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1BO75841 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
UPK1BO75841 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1BO75841 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1BO75841 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1BO75841 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1BO75841 MIR130B-202ENST00000385018 82 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1BO75841 LRRC37BP1-201ENST00000398851 714 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AL645733.1-201ENST00000402250 217 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1BO75841 RN7SKP146-201ENST00000410242 334 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 OR2AM1P-201ENST00000422137 422 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1BO75841 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1BO75841 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1BO75841 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.32□□□□□ -1.72
UPK1BO75841 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1BO75841 HMGN1P32-201ENST00000441744 256 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AC114324.2-202ENST00000503812 134 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 HMGN1P16-201ENST00000508308 283 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1BO75841 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1BO75841 AP003396.4-201ENST00000527574 265 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AP001804.2-201ENST00000533932 910 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
UPK1BO75841 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.32□□□□□ -1.72
UPK1BO75841 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.32□□□□□ -1.72
UPK1BO75841 AL358913.1-201ENST00000554342 121 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AL121839.1-201ENST00000556233 1185 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1BO75841 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1BO75841 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1BO75841 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1BO75841 AL139395.1-201ENST00000603662 160 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1BO75841 AP005131.7-201ENST00000610087 611 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AL118522.2-201ENST00000616045 615 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.32□□□□□ -1.72
UPK1BO75841 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.32□□□□□ -1.72
UPK1BO75841 AP003400.2-201ENST00000624036 666 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UPK1BO75841 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
UPK1BO75841 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UPK1BO75841 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.32□□□□□ -1.72
UPK1BO75841 HSPD1P9-201ENST00000420325 1636 ntBASIC4.32□□□□□ -1.72
UPK1BO75841 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1BO75841 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1BO75841 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1BO75841 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1BO75841 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1BO75841 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
UPK1BO75841 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1BO75841 OR10J6P-201ENST00000289731 930 ntBASIC4.31□□□□□ -1.72
UPK1BO75841 OR52B1P-201ENST00000316506 909 ntBASIC4.31□□□□□ -1.72
UPK1BO75841 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
UPK1BO75841 RNA5SP90-201ENST00000364801 99 ntBASIC4.31□□□□□ -1.72
UPK1BO75841 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.31□□□□□ -1.72
UPK1BO75841 RHOT1P2-201ENST00000366423 333 ntBASIC4.31□□□□□ -1.72
UPK1BO75841 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UPK1BO75841 MIR1231-201ENST00000408101 92 ntBASIC4.31□□□□□ -1.72
UPK1BO75841 AC098592.2-201ENST00000413158 265 ntBASIC4.31□□□□□ -1.72
UPK1BO75841 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.31□□□□□ -1.72
UPK1BO75841 AC004552.1-201ENST00000419089 348 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms