Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RBFOX3A6NFN3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 HSPD1P9-201ENST00000420325 1636 ntBASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.09□□□□□ -1.76
RBFOX3A6NFN3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC009237.10-201ENST00000414112 510 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AL139148.1-201ENST00000427122 680 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AL450263.2-201ENST00000439400 589 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AMYP1-201ENST00000440059 1023 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 CFL1P4-201ENST00000451536 498 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 RPS17P15-201ENST00000475609 349 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 RPL37P23-201ENST00000492641 294 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC108751.5-201ENST00000492880 1336 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC091874.2-201ENST00000505889 720 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC018442.3-201ENST00000523025 183 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AP003396.4-201ENST00000527574 265 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 HMGN2P36-201ENST00000529541 409 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AP002373.2-201ENST00000541631 1060 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC006512.2-201ENST00000543250 486 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC092332.1-201ENST00000563684 829 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 IMMP1LP1-201ENST00000605170 488 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC079298.2-201ENST00000623885 459 ntBASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RBFOX3A6NFN3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 THAP12P8-201ENST00000447914 2115 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC104966.1-201ENST00000467010 1464 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC093225.1-201ENST00000506867 1408 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 CASC19-206ENST00000641028 1430 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 CASC19-221ENST00000641309 1382 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AL353625.1-202ENST00000366273 571 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AL592291.1-201ENST00000403830 352 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 RNA5SP146-201ENST00000410743 123 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 FABP7P1-201ENST00000424004 391 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC005008.1-201ENST00000456151 612 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC079168.1-201ENST00000458741 345 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC068228.1-201ENST00000461723 211 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 RPL7AP28-201ENST00000464513 571 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 RPL23AP37-201ENST00000479658 549 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 AC011411.1-201ENST00000509592 876 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 UGT2A3P7-201ENST00000510485 734 ntBASIC4.07□□□□□ -1.76
RBFOX3A6NFN3 MTND6P2-201ENST00000512226 524 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms