Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 SSX9-201ENST00000376909 591 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 Y_RNA.384-201ENST00000383909 102 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 MIR99A-201ENST00000384906 81 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 MIR1272-201ENST00000408106 129 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 OR9R1P-201ENST00000412200 877 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC006065.1-201ENST00000422539 802 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 MTCO3P46-201ENST00000425787 232 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC234771.2-201ENST00000445718 597 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 SBDSP1-204ENST00000453858 737 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AL135752.1-201ENST00000479477 471 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 ACTG1P13-201ENST00000486987 1043 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC091982.1-201ENST00000518134 520 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 OR1E3-201ENST00000575608 948 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 MIR4732-201ENST00000581873 76 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC011445.2-201ENST00000599274 173 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AL162413.1-201ENST00000603198 110 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC107214.2-201ENST00000608204 634 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC234782.5-201ENST00000617723 324 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC068831.8-201ENST00000620171 435 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC005609.2-201ENST00000623320 592 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 TDGF1P3-202ENST00000602699 2710 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AL080317.3-201ENST00000607434 4315 ntBASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CNTNAP3Q9BZ76 AC127502.2-201ENST00000602663 2351 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AL137058.3-201ENST00000624531 3099 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 OR2A20P-201ENST00000479887 2913 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 RNU6-451P-201ENST00000362921 107 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 RNU6-702P-201ENST00000364982 107 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 SNORA63.7-201ENST00000365579 123 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 RNU6-1062P-201ENST00000383908 107 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AC087752.1-201ENST00000391360 558 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 FAUP2-201ENST00000394301 401 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AL121835.1-201ENST00000404250 354 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 MIR548F4-201ENST00000408515 105 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 RNA5SP155-201ENST00000411154 129 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AL355862.1-201ENST00000412705 353 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 HMGB1P45-201ENST00000435986 653 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 AC079193.1-201ENST00000460497 588 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 RPSAP48-201ENST00000466509 889 ntBASIC7.12□□□□□ -1.27
CNTNAP3Q9BZ76 OR7E99P-201ENST00000505750 922 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms