Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AL034418.1-201ENST00000448675 860 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 MRPL42P6-201ENST00000486397 371 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 SNX5P1-201ENST00000505757 1041 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AP003327.1-201ENST00000529684 127 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 BNIP3P30-201ENST00000601184 574 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC106791.2-201ENST00000604680 391 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AL355073.2-201ENST00000612106 557 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC025253.1-201ENST00000613623 543 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC136428.4-201ENST00000634254 1155 ntBASIC1.91□□□□□ -2.1
HMCN1Q96RW7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 ZNF154-202ENST00000512439 5687 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 CACNA1C-203ENST00000344100 6634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMCN1Q96RW7 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 SNORD16-201ENST00000362803 99 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 MIR670-201ENST00000390142 98 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 MTCO1P17-201ENST00000411522 491 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 LUZP4P1-201ENST00000415420 344 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AL121578.1-201ENST00000428051 892 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AL353754.1-201ENST00000440219 340 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 TRIM60P16-201ENST00000444048 694 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 VN1R104P-201ENST00000505115 1009 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AP005119.2-201ENST00000579735 1105 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AC006254.2-201ENST00000603259 279 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AC007423.1-201ENST00000605009 627 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AL050343.2-201ENST00000607338 280 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AL135786.2-201ENST00000608422 615 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 BEND3-202ENST00000429433 6654 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 LIMCH1-205ENST00000503057 5467 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 HSPA8P18-201ENST00000439846 1928 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.1
HMCN1Q96RW7 RNA5SP205-201ENST00000364653 136 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 RPS24P12-201ENST00000402084 394 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AC016739.1-201ENST00000405359 345 ntBASIC1.9□□□□□ -2.1
HMCN1Q96RW7 AC073136.2-201ENST00000417282 849 ntBASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms