Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 NXF4-202ENST00000416098 1465 ntBASIC5.71□□□□□ -1.5
SLC46A1Q96NT5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC245100.2-201ENST00000454544 1679 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SELENOWP1-201ENST00000322792 252 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 RNA5SP375-201ENST00000362975 119 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SNORA74A-201ENST00000364089 198 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AL049545.1-201ENST00000401856 572 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SNRPEP6-201ENST00000407465 277 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC010385.1-201ENST00000412374 256 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 NPM1P4-201ENST00000414095 812 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 MTND4LP17-201ENST00000414607 293 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 OR2X1P-201ENST00000421144 687 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 ETF1P3-201ENST00000430422 1160 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC093716.1-201ENST00000435923 377 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SEPT14P24-201ENST00000447236 180 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 TRY2P-201ENST00000448860 689 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC112187.1-201ENST00000455837 479 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 RN7SL610P-201ENST00000463845 291 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SIAH1P1-201ENST00000479411 923 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 OR11I1P-201ENST00000486033 954 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 NENFP3-201ENST00000503735 313 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC109481.1-201ENST00000509173 282 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 CYP4F27P-201ENST00000514557 494 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 RN7SKP34-201ENST00000516142 244 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC087897.1-201ENST00000550134 156 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AL049870.4-201ENST00000555741 486 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 PCNAP1-202ENST00000595299 752 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AC012557.1-201ENST00000607115 611 ntBASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SLC46A1Q96NT5 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 AC017007.4-201ENST00000503353 1352 ntBASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 RNA5SP394-201ENST00000364216 119 ntBASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 RNA5SP500-201ENST00000364486 119 ntBASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC46A1Q96NT5 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms