Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 FP236315.2-201ENST00000624506 2456 ntBASIC8.56□□□□□ -1.04
NUBP1P53384 FP671120.2-201ENST00000624806 2456 ntBASIC8.56□□□□□ -1.04
NUBP1P53384 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
NUBP1P53384 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NUBP1P53384 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NUBP1P53384 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NUBP1P53384 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NUBP1P53384 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC8.56□□□□□ -1.04
NUBP1P53384 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 AC108751.5-201ENST00000492880 1336 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 DDX11L16-201ENST00000507418 1306 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 VWA5A-204ENST00000449321 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
NUBP1P53384 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 YME1L1-209ENST00000613434 4127 ntTSL 2 BASIC8.55□□□□□ -1.04
NUBP1P53384 AL139811.2-201ENST00000373465 1630 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
NUBP1P53384 XIST-211ENST00000635841 1734 ntTSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 ZNF155-201ENST00000270014 2596 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 RNU6-740P-201ENST00000364734 105 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 SNORA73A-201ENST00000364938 206 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 Y_RNA.577-201ENST00000384794 101 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
NUBP1P53384 AC004386.1-201ENST00000393214 761 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 ZNF37CP-201ENST00000406795 241 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 RPL12P10-201ENST00000413498 498 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 RPL37P1-201ENST00000432310 284 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 AL512882.1-201ENST00000436086 832 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 CEACAMP9-201ENST00000442990 513 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 RNU7-59P-201ENST00000459101 61 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 FTH1P2-201ENST00000466086 412 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 RN7SL338P-201ENST00000481467 293 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 RN7SL101P-201ENST00000496350 279 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 AC114964.1-201ENST00000502306 1111 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 AC093816.1-201ENST00000515076 913 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 SNORA25.14-201ENST00000516481 132 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 AC091987.1-202ENST00000522464 789 ntTSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
NUBP1P53384 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 AC007952.7-201ENST00000583141 757 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
NUBP1P53384 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 OR6L2P-201ENST00000608207 925 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 AC004832.4-201ENST00000608952 331 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 AC131159.2-201ENST00000613236 702 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
NUBP1P53384 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.55□□□□□ -1.04
NUBP1P53384 NXPE1-201ENST00000251921 1888 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 AC074029.4-201ENST00000624796 1859 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.55□□□□□ -1.04
NUBP1P53384 ZNF91-201ENST00000300619 5489 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.55□□□□□ -1.04
NUBP1P53384 AC103710.2-202ENST00000641454 2853 ntBASIC8.55□□□□□ -1.04
NUBP1P53384 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
NUBP1P53384 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC8.54□□□□□ -1.04
NUBP1P53384 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC8.54□□□□□ -1.04
NUBP1P53384 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
NUBP1P53384 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 ZNF33CP-201ENST00000432492 2030 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 LPAR3-202ENST00000440886 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 STXBP1-209ENST00000626539 3840 ntTSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 HIF1A-203ENST00000394997 3922 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 AP000350.7-201ENST00000624923 8030 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC8.54□□□□□ -1.04
NUBP1P53384 SH3TC2-215ENST00000515425 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 NLRP9P1-201ENST00000540920 2655 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 AC107021.2-201ENST00000567714 2095 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 Y_RNA.122-201ENST00000363331 96 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 Y_RNA.200-201ENST00000364018 102 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 MIR27A-201ENST00000385073 78 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 FDPSP6-201ENST00000425091 512 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 FAR2P4-202ENST00000425399 584 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms