Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MIR193BHG-214ENST00000641765 509 ntBASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 AL133279.3-201ENST00000563140 2352 ntBASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 OR6M2P-202ENST00000641780 2063 ntBASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 AC124045.1-201ENST00000606008 1953 ntBASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
VPS9D1Q9Y2B5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC117382.2-201ENST00000564748 3151 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 RNU5E-1-201ENST00000362477 120 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 RNU6-200P-201ENST00000364743 107 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AL672167.2-201ENST00000377164 879 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 Y_RNA.414-201ENST00000384011 101 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AL161787.1-201ENST00000401543 174 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 SNORD3J-201ENST00000408473 190 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 RPLP1P10-201ENST00000413972 339 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 GEMIN2P2-201ENST00000418195 715 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 RPL36P1-201ENST00000419720 225 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 Z74696.1-201ENST00000428208 1123 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 DNAJC19P7-201ENST00000428811 344 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 BRWD1P3-201ENST00000428816 390 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 CEP57L1P1-201ENST00000430943 1201 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AL513318.1-201ENST00000437925 991 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC092013.1-201ENST00000438795 332 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AL356010.1-201ENST00000456364 102 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 RPL32P9-201ENST00000487963 407 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AK3P4-201ENST00000504283 583 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC091965.3-201ENST00000506236 208 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC108073.1-201ENST00000508231 674 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 RNU6-885P-201ENST00000516607 104 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 PGAM1P8-201ENST00000526979 453 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AP003072.2-201ENST00000527756 676 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 MIR3128-201ENST00000581957 66 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AF038458.1-201ENST00000588406 262 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC011468.4-201ENST00000603942 409 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 MIR8062-201ENST00000621515 85 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AL136967.1-201ENST00000625120 441 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 OR11H5P-202ENST00000641612 1325 ntBASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
VPS9D1Q9Y2B5 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.97□□□□□ -1.13
VPS9D1Q9Y2B5 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
VPS9D1Q9Y2B5 AC087203.2-201ENST00000526502 1587 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms