Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SNORA2.3-201ENST00000383920 135 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 RPS12P10-201ENST00000427031 377 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.72□□□□□ -1.33
COL16A1Q07092 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.72□□□□□ -1.33
COL16A1Q07092 SNORA67.7-201ENST00000516664 135 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.72□□□□□ -1.33
COL16A1Q07092 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.72□□□□□ -1.33
COL16A1Q07092 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.72□□□□□ -1.33
COL16A1Q07092 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.72□□□□□ -1.33
COL16A1Q07092 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.72□□□□□ -1.33
COL16A1Q07092 SNX18P1Y-201ENST00000616231 511 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 AC002044.3-201ENST00000623314 541 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 AC120338.1-201ENST00000625074 1541 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
COL16A1Q07092 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL16A1Q07092 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL16A1Q07092 AC073365.1-203ENST00000641055 1992 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL16A1Q07092 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.72□□□□□ -1.33
COL16A1Q07092 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL16A1Q07092 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL16A1Q07092 RBPJP2-201ENST00000618187 1444 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL16A1Q07092 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL16A1Q07092 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
COL16A1Q07092 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL16A1Q07092 ATP5HP3-201ENST00000396994 486 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.72□□□□□ -1.33
COL16A1Q07092 AC073465.2-201ENST00000440938 498 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 PHBP16-201ENST00000446318 950 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.72□□□□□ -1.33
COL16A1Q07092 AL358232.1-201ENST00000448030 501 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 RPS5P7-201ENST00000456664 608 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.72□□□□□ -1.33
COL16A1Q07092 RNA5SP196-201ENST00000625967 102 ntBASIC6.72□□□□□ -1.33
COL16A1Q07092 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL16A1Q07092 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.72□□□□□ -1.33
COL16A1Q07092 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.72□□□□□ -1.33
COL16A1Q07092 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
COL16A1Q07092 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
COL16A1Q07092 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
COL16A1Q07092 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL16A1Q07092 CAST-222ENST00000508579 1758 ntTSL 2 BASIC6.71□□□□□ -1.33
COL16A1Q07092 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.71□□□□□ -1.33
COL16A1Q07092 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL16A1Q07092 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
COL16A1Q07092 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL16A1Q07092 AL158152.1-201ENST00000602652 1435 ntBASIC6.71□□□□□ -1.34
COL16A1Q07092 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.71□□□□□ -1.34
COL16A1Q07092 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL16A1Q07092 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL16A1Q07092 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.71□□□□□ -1.34
COL16A1Q07092 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL16A1Q07092 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.71□□□□□ -1.34
COL16A1Q07092 AC106806.2-201ENST00000509365 500 ntBASIC6.71□□□□□ -1.34
COL16A1Q07092 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.71□□□□□ -1.34
COL16A1Q07092 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.71□□□□□ -1.34
COL16A1Q07092 MIR4420-201ENST00000583944 77 ntBASIC6.71□□□□□ -1.34
COL16A1Q07092 AC060780.2-201ENST00000589047 198 ntBASIC6.71□□□□□ -1.34
COL16A1Q07092 AC011626.1-201ENST00000604710 562 ntBASIC6.71□□□□□ -1.34
COL16A1Q07092 AC100847.1-201ENST00000611316 481 ntBASIC6.71□□□□□ -1.34
COL16A1Q07092 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.71□□□□□ -1.34
COL16A1Q07092 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.71□□□□□ -1.34
COL16A1Q07092 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL16A1Q07092 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL16A1Q07092 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.7□□□□□ -1.34
COL16A1Q07092 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.7□□□□□ -1.34
COL16A1Q07092 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL16A1Q07092 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.7□□□□□ -1.34
COL16A1Q07092 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC6.7□□□□□ -1.34
COL16A1Q07092 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COL16A1Q07092 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 MIR589-201ENST00000385238 99 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 SNORA11.1-201ENST00000408133 129 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 RNA5SP317-201ENST00000410176 116 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 RNA5SP311-201ENST00000411290 116 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 AC092651.1-201ENST00000426110 312 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 AL390879.1-201ENST00000439143 386 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.7□□□□□ -1.34
COL16A1Q07092 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.7□□□□□ -1.34
COL16A1Q07092 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.7□□□□□ -1.34
COL16A1Q07092 RNA5SP315-201ENST00000516340 116 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 RNA5SP312-201ENST00000517068 116 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 AC019322.1-201ENST00000571869 389 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 AP005901.4-201ENST00000577336 569 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 AP000843.1-201ENST00000624880 701 ntBASIC6.7□□□□□ -1.34
COL16A1Q07092 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.7□□□□□ -1.34
COL16A1Q07092 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
COL16A1Q07092 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.7□□□□□ -1.34
COL16A1Q07092 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.7□□□□□ -1.34
COL16A1Q07092 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COL16A1Q07092 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL16A1Q07092 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms