Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RNA5SP232-201ENST00000364144 119 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 USP48-203ENST00000374732 3037 ntTSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 MIR1275-201ENST00000408770 80 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 RN7SKP59-201ENST00000410520 314 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 HMGB1P11-201ENST00000413899 637 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 BX890604.2-201ENST00000427883 474 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 MRPL50P4-201ENST00000446432 475 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 RPL7P48-201ENST00000461513 746 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 MTCO2P29-201ENST00000465212 189 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 ACTR3P3-201ENST00000480448 893 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 RNU6-1046P-201ENST00000516538 107 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 GNG2-203ENST00000553432 577 ntTSL 4 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC004817.2-201ENST00000561794 651 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC009977.1-201ENST00000586015 570 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC090948.2-201ENST00000607363 564 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC004908.2-201ENST00000609090 574 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC019193.3-201ENST00000609144 554 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC093788.1-201ENST00000609356 927 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AP005329.3-201ENST00000609924 686 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 AC007342.8-201ENST00000623278 678 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 TPTEP1-208ENST00000636884 213 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 MIR1910-201ENST00000636955 80 ntBASIC9.69□□□□□ -0.86
PHF8Q9UPP1 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PHF8Q9UPP1 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 NACA-216ENST00000550952 2922 ntTSL 2 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 ODF3-202ENST00000342593 386 ntTSL 5 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 SNORD35A-201ENST00000363389 86 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 RNU6-723P-201ENST00000383973 107 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 ATP5HP3-201ENST00000396994 486 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 RNU2-39P-201ENST00000410604 198 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 PIGFP2-201ENST00000421400 651 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 UQCRHP1-204ENST00000424609 274 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 BLOC1S2P1-201ENST00000428431 301 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 OR2B7P-201ENST00000429302 934 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AL512605.1-202ENST00000441919 381 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AC234771.2-201ENST00000445718 597 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 RPS26P11-201ENST00000463445 348 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 RPS26P6-201ENST00000475156 348 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 RN7SL797P-201ENST00000486314 297 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AC108120.2-201ENST00000512973 294 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 RNU6-1170P-201ENST00000515974 106 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 RN7SKP196-201ENST00000516267 345 ntBASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PHF8Q9UPP1 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms