Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 OR5W1P-201ENST00000423705 938 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 VN1R10P-201ENST00000447106 875 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 HMGB1P16-201ENST00000447155 540 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 MTCO1P48-201ENST00000448024 1096 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 RPL23AP64-201ENST00000469465 435 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 TMED11P-201ENST00000479478 690 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 RPL23AP37-201ENST00000479658 549 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 RN7SL849P-201ENST00000485236 295 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 SNX18P23-201ENST00000510867 677 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC108120.2-201ENST00000512973 294 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 OR4C2P-201ENST00000530855 1064 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 GTF2IP22-201ENST00000554443 182 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AL049870.4-201ENST00000555741 486 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 MIR3689C-201ENST00000581239 72 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AL135999.3-201ENST00000610501 812 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AL352984.2-202ENST00000613699 155 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AL138960.1-201ENST00000613838 513 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC114546.4-201ENST00000624413 369 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC024023.1-201ENST00000624530 922 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AL356585.10-201ENST00000641883 123 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.61□□□□□ -1.35
SSU72Q9NP77 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 AC011369.2-201ENST00000624423 1567 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SSU72Q9NP77 EPS15P1-202ENST00000459691 2071 ntBASIC6.61□□□□□ -1.35
SSU72Q9NP77 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 TEX21P-201ENST00000447107 1476 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AKAP17BP-201ENST00000431706 2719 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC109315.1-201ENST00000584143 1347 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SSU72Q9NP77 ENSAP3-201ENST00000312710 333 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 RNU1-59P-201ENST00000364829 162 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AL672167.2-201ENST00000377164 879 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 SNORD115-47-201ENST00000391226 86 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 RNA5SP53-201ENST00000391299 120 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 OR6C69P-201ENST00000394268 893 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 MIR1277-201ENST00000408536 78 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 RNA5SP177-201ENST00000410122 107 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 RNU2-41P-201ENST00000410991 178 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 PTP4A1P1-201ENST00000420539 515 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 GAPDHP69-201ENST00000425504 1008 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC245884.2-201ENST00000426257 404 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC016908.1-201ENST00000442571 1219 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 RPS26P30-201ENST00000443431 335 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 PAXBP1P1-201ENST00000449315 447 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 CALM1P2-201ENST00000452941 448 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 SNX18P26-201ENST00000458433 740 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 RPS4XP12-201ENST00000461747 709 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 PSAT1P4-201ENST00000466500 526 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.6□□□□□ -1.35
SSU72Q9NP77 RPS7P6-201ENST00000485777 579 ntBASIC6.6□□□□□ -1.35
SSU72Q9NP77 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms