Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.32□□□□□ -1.24
LYSMD3Q7Z3D4 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LYSMD3Q7Z3D4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LYSMD3Q7Z3D4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 NF1P8-201ENST00000415351 1461 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 MTCO1P25-201ENST00000414449 1799 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC009220.2-201ENST00000489759 1751 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 Y_RNA.1-201ENST00000352915 104 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 RNU6-543P-201ENST00000362576 108 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 RNU5D-1-201ENST00000363299 116 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 MIR1284-201ENST00000408337 120 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 RPS3AP3-201ENST00000411933 242 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 CHCHD3P1-201ENST00000425516 676 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AL138479.1-201ENST00000426913 484 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 PMS2P11-201ENST00000451831 574 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 MTND5P16-201ENST00000460269 1703 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 RPS20P20-201ENST00000460498 340 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 HMGN2P25-201ENST00000486956 268 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC012170.1-201ENST00000495139 359 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 RNU6-1281P-201ENST00000516223 105 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC105029.1-201ENST00000520250 669 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 OR6M2P-201ENST00000529831 871 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 EXOSC3P2-201ENST00000594464 497 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC068733.2-201ENST00000605434 1418 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC093788.1-201ENST00000609356 927 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AL603758.1-201ENST00000618654 241 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC073488.7-201ENST00000633785 778 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 MIR1302-1-201ENST00000637932 143 ntBASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
LYSMD3Q7Z3D4 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 OR52K3P-202ENST00000641797 1729 ntBASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 AC011447.7-201ENST00000624228 1590 ntBASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 RAD17P2-201ENST00000451754 1977 ntBASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 RPL24P7-201ENST00000399435 453 ntBASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 OR4K12P-201ENST00000406538 961 ntBASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 GEMIN2P2-201ENST00000418195 715 ntBASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 AC018630.2-202ENST00000422992 927 ntBASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 OR5P4P-201ENST00000424698 917 ntBASIC7.3□□□□□ -1.24
LYSMD3Q7Z3D4 FDPSP6-201ENST00000425091 512 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms