Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 RNU1-106P-201ENST00000384382 164 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 MIR765-201ENST00000390226 114 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 NPM1P40-201ENST00000412758 733 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 SOCS5P3-201ENST00000425115 1576 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 Z92846.1-201ENST00000456203 268 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 OR11I1P-201ENST00000486033 954 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 RPL15P21-201ENST00000495592 567 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 RN7SL808P-201ENST00000496066 299 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 RPSAP51-201ENST00000497462 645 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AC134349.2-201ENST00000535136 910 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 MIR3936-201ENST00000584304 110 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 MIR6133-201ENST00000617057 108 ntBASIC6.29□□□□□ -1.4
CTR9Q6PD62 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CTR9Q6PD62 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CTR9Q6PD62 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CTR9Q6PD62 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CTR9Q6PD62 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTR9Q6PD62 U3.3-201ENST00000362986 216 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 EI24P4-201ENST00000423683 1078 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC009127.1-201ENST00000467090 155 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC091544.1-201ENST00000484702 348 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 HMGN1P9-201ENST00000515212 298 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC044860.2-201ENST00000561005 179 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 AL390726.5-202ENST00000564800 256 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.28□□□□□ -1.4
CTR9Q6PD62 AL162431.4-201ENST00000604674 411 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 AL021707.7-201ENST00000607991 416 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTR9Q6PD62 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTR9Q6PD62 AC092747.4-201ENST00000620519 1861 ntBASIC6.28□□□□□ -1.4
CTR9Q6PD62 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CTR9Q6PD62 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 ZNF733P-202ENST00000444809 1573 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 SYT14P1-202ENST00000600441 1448 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 SNORA17.1-201ENST00000362945 126 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 SNORA70-201ENST00000384436 135 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 U3.36-201ENST00000408418 213 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 RPL23AP27-201ENST00000415161 451 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 AC008410.1-201ENST00000483777 339 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 AC022832.1-201ENST00000530718 645 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CTR9Q6PD62 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.27□□□□□ -1.41
CTR9Q6PD62 LINC01739-205ENST00000641890 573 ntBASIC6.27□□□□□ -1.41
CTR9Q6PD62 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms