Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
XPAP23025 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.15□□□□□ -1.43
XPAP23025 HDAC1P2-201ENST00000453661 1398 ntBASIC6.15□□□□□ -1.43
XPAP23025 AL354854.1-201ENST00000455940 1363 ntBASIC6.15□□□□□ -1.43
XPAP23025 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
XPAP23025 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
XPAP23025 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
XPAP23025 AC096921.2-201ENST00000561507 1916 ntBASIC6.15□□□□□ -1.43
XPAP23025 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.15□□□□□ -1.43
XPAP23025 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.15□□□□□ -1.43
XPAP23025 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
XPAP23025 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
XPAP23025 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
XPAP23025 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.14□□□□□ -1.43
XPAP23025 BRAFP1-201ENST00000445336 2703 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.14□□□□□ -1.43
XPAP23025 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 AL138820.1-201ENST00000617901 5305 ntBASIC6.14□□□□□ -1.43
XPAP23025 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.14□□□□□ -1.43
XPAP23025 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 Y_RNA.578-201ENST00000390903 88 ntBASIC6.14□□□□□ -1.43
XPAP23025 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 AL136310.1-201ENST00000404926 654 ntBASIC6.14□□□□□ -1.43
XPAP23025 MIR1282-201ENST00000408865 101 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC245096.1-201ENST00000413104 546 ntBASIC6.14□□□□□ -1.43
XPAP23025 AL096829.1-201ENST00000413677 457 ntBASIC6.14□□□□□ -1.43
XPAP23025 RPS17P17-201ENST00000419392 409 ntBASIC6.14□□□□□ -1.43
XPAP23025 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 USP9YP11-201ENST00000427537 717 ntBASIC6.14□□□□□ -1.43
XPAP23025 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.14□□□□□ -1.43
XPAP23025 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.14□□□□□ -1.43
XPAP23025 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.14□□□□□ -1.43
XPAP23025 DNAJA1P5-201ENST00000440278 943 ntBASIC6.14□□□□□ -1.43
XPAP23025 EIF5AP4-201ENST00000441206 465 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.14□□□□□ -1.43
XPAP23025 ZNF619P1-201ENST00000446539 752 ntBASIC6.14□□□□□ -1.43
XPAP23025 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 USP9YP25-201ENST00000457708 443 ntBASIC6.14□□□□□ -1.43
XPAP23025 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 AC092865.4-201ENST00000477936 615 ntBASIC6.14□□□□□ -1.43
XPAP23025 LSM3P4-201ENST00000502948 309 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 AC008837.1-201ENST00000511513 412 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC021193.1-201ENST00000511607 420 ntBASIC6.14□□□□□ -1.43
XPAP23025 RNA5SP303-201ENST00000516192 130 ntBASIC6.14□□□□□ -1.43
XPAP23025 MTCYBP19-201ENST00000517463 1124 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 AC104417.1-201ENST00000523974 751 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC087373.1-201ENST00000524920 491 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.14□□□□□ -1.43
XPAP23025 AC079905.1-201ENST00000549280 475 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.14□□□□□ -1.43
XPAP23025 AC007956.1-201ENST00000555623 542 ntBASIC6.14□□□□□ -1.43
XPAP23025 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 FAM106CP-201ENST00000582212 507 ntBASIC6.14□□□□□ -1.43
XPAP23025 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.14□□□□□ -1.43
XPAP23025 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 AC067773.1-201ENST00000603284 1094 ntBASIC6.14□□□□□ -1.43
XPAP23025 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 AC007349.4-201ENST00000608114 532 ntBASIC6.14□□□□□ -1.43
XPAP23025 AC129778.1-202ENST00000623812 261 ntBASIC6.14□□□□□ -1.43
XPAP23025 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.14□□□□□ -1.43
XPAP23025 AC073488.3-201ENST00000631611 778 ntBASIC6.14□□□□□ -1.43
XPAP23025 AL591379.1-207ENST00000635982 261 ntBASIC6.14□□□□□ -1.43
XPAP23025 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.14□□□□□ -1.43
XPAP23025 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.14□□□□□ -1.43
XPAP23025 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.14□□□□□ -1.43
XPAP23025 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.14□□□□□ -1.43
XPAP23025 RBMY1HP-201ENST00000382759 1389 ntBASIC6.14□□□□□ -1.43
XPAP23025 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.14□□□□□ -1.43
XPAP23025 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
XPAP23025 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.14□□□□□ -1.43
XPAP23025 QRSL1P1-201ENST00000400977 1540 ntBASIC6.14□□□□□ -1.43
XPAP23025 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms