Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.67□□□□□ -1.66
UBCP0CG48 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBCP0CG48 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UBCP0CG48 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.67□□□□□ -1.66
UBCP0CG48 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.67□□□□□ -1.66
UBCP0CG48 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.67□□□□□ -1.66
UBCP0CG48 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UBCP0CG48 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UBCP0CG48 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UBCP0CG48 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UBCP0CG48 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.66□□□□□ -1.66
UBCP0CG48 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
UBCP0CG48 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 AC023421.1-201ENST00000590535 1785 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 AC004817.4-201ENST00000602396 3625 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 RNU4-44P-201ENST00000363050 141 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 AC104297.1-201ENST00000393779 870 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 Z93019.1-201ENST00000416450 973 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 MTND6P12-201ENST00000428247 522 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 AC046176.1-201ENST00000435260 1170 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 Z84478.1-201ENST00000438230 1219 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 GAPDHP58-201ENST00000438477 1006 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.66□□□□□ -1.66
UBCP0CG48 AL157385.1-201ENST00000446973 268 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 NPM1P29-201ENST00000483112 803 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 AC011411.1-201ENST00000509592 876 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 CYCSP22-201ENST00000517555 339 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 NPM1P52-201ENST00000518264 846 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.66□□□□□ -1.66
UBCP0CG48 AC100784.1-201ENST00000522790 310 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.66□□□□□ -1.66
UBCP0CG48 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.66□□□□□ -1.66
UBCP0CG48 BNIP3P1-201ENST00000547295 580 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.66□□□□□ -1.66
UBCP0CG48 AL049872.1-201ENST00000556323 322 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.66□□□□□ -1.66
UBCP0CG48 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.66□□□□□ -1.66
UBCP0CG48 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 MIR744-201ENST00000578242 98 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 AC022884.2-201ENST00000578535 580 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 MIR6889-201ENST00000613185 59 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.66□□□□□ -1.66
UBCP0CG48 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.66□□□□□ -1.66
UBCP0CG48 MIR193BHG-214ENST00000641765 509 ntBASIC4.66□□□□□ -1.66
UBCP0CG48 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBCP0CG48 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
UBCP0CG48 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.65□□□□□ -1.66
UBCP0CG48 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
UBCP0CG48 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
UBCP0CG48 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.65□□□□□ -1.66
UBCP0CG48 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.65□□□□□ -1.67
UBCP0CG48 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
UBCP0CG48 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
UBCP0CG48 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
UBCP0CG48 AC023490.2-201ENST00000359859 470 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
UBCP0CG48 RNA5SP487-201ENST00000410186 122 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.65□□□□□ -1.67
UBCP0CG48 AC104333.2-201ENST00000422630 192 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.65□□□□□ -1.67
UBCP0CG48 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.65□□□□□ -1.67
UBCP0CG48 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.65□□□□□ -1.67
UBCP0CG48 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.65□□□□□ -1.67
UBCP0CG48 GSTM5P1-201ENST00000434751 660 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
UBCP0CG48 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.65□□□□□ -1.67
UBCP0CG48 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.65□□□□□ -1.67
UBCP0CG48 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 RPL7P41-201ENST00000485823 957 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 RN7SL814P-201ENST00000487715 300 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 AC090638.1-201ENST00000498296 909 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.65□□□□□ -1.67
UBCP0CG48 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.65□□□□□ -1.67
UBCP0CG48 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.65□□□□□ -1.67
UBCP0CG48 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
UBCP0CG48 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.65□□□□□ -1.67
UBCP0CG48 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.65□□□□□ -1.67
UBCP0CG48 AC060766.1-201ENST00000590824 627 ntBASIC4.65□□□□□ -1.67
UBCP0CG48 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms