Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 U3.22-201ENST00000391120 215 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A1P02462 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.04□□□□□ -1.44
COL4A1P02462 AC021876.1-201ENST00000425959 359 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 RPL23AP1-201ENST00000428990 471 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A1P02462 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A1P02462 AC026688.1-201ENST00000520639 1168 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A1P02462 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A1P02462 PRPF19P1-201ENST00000584766 898 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 AC021422.1-201ENST00000621212 473 ntBASIC6.04□□□□□ -1.44
COL4A1P02462 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.04□□□□□ -1.44
COL4A1P02462 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A1P02462 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL4A1P02462 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A1P02462 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A1P02462 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A1P02462 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A1P02462 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A1P02462 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A1P02462 SMG1P7-201ENST00000565246 2704 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A1P02462 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.03□□□□□ -1.44
COL4A1P02462 OR1L6-202ENST00000373684 1044 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 RPL21P108-201ENST00000413857 481 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 RPEP3-201ENST00000425462 676 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.03□□□□□ -1.44
COL4A1P02462 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.03□□□□□ -1.44
COL4A1P02462 AC234781.3-201ENST00000452540 973 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 AC020898.1-201ENST00000474167 787 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL4A1P02462 AC068831.4-201ENST00000556118 109 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.03□□□□□ -1.44
COL4A1P02462 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A1P02462 AC010435.1-201ENST00000623353 1177 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
COL4A1P02462 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A1P02462 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A1P02462 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL4A1P02462 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 AL137100.1-201ENST00000556703 1620 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 CCT8P1-201ENST00000413611 1657 ntBASIC6.03□□□□□ -1.44
COL4A1P02462 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A1P02462 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.02□□□□□ -1.44
COL4A1P02462 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.02□□□□□ -1.44
COL4A1P02462 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A1P02462 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A1P02462 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A1P02462 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A1P02462 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
COL4A1P02462 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
COL4A1P02462 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A1P02462 AL021331.1-201ENST00000402817 582 ntBASIC6.02□□□□□ -1.45
COL4A1P02462 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.02□□□□□ -1.45
COL4A1P02462 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.02□□□□□ -1.45
COL4A1P02462 PRPF38AP1-201ENST00000451976 933 ntBASIC6.02□□□□□ -1.45
COL4A1P02462 RPL7AP52-201ENST00000458096 790 ntBASIC6.02□□□□□ -1.45
COL4A1P02462 AC111000.6-201ENST00000514471 709 ntBASIC6.02□□□□□ -1.45
COL4A1P02462 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A1P02462 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A1P02462 AC010424.2-201ENST00000607594 443 ntBASIC6.02□□□□□ -1.45
COL4A1P02462 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A1P02462 AC009643.2-201ENST00000603543 1448 ntBASIC6.02□□□□□ -1.45
COL4A1P02462 SOCS5P3-201ENST00000425115 1576 ntBASIC6.02□□□□□ -1.45
COL4A1P02462 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A1P02462 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.02□□□□□ -1.45
COL4A1P02462 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A1P02462 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL4A1P02462 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A1P02462 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL4A1P02462 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
COL4A1P02462 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
COL4A1P02462 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 AC139713.2-214ENST00000642059 1811 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 RPS16P5-201ENST00000406501 404 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 GPS2P1-201ENST00000411761 986 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 OR1H1P-201ENST00000448731 937 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 AC022133.1-201ENST00000490961 571 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.01□□□□□ -1.45
COL4A1P02462 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
COL4A1P02462 AC116553.2-201ENST00000564203 463 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 MIR5699-201ENST00000578903 90 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 AC091932.2-201ENST00000623014 291 ntBASIC6.01□□□□□ -1.45
COL4A1P02462 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL4A1P02462 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
COL4A1P02462 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COL4A1P02462 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.01□□□□□ -1.45
COL4A1P02462 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms