Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 REG1CP-206ENST00000447469 496 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC016724.1-201ENST00000453215 421 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 RPL7L1P3-201ENST00000455249 689 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 GTF2IP12-201ENST00000456547 356 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 CST12P-201ENST00000457644 362 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 RPL7AP10-201ENST00000481016 791 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 RN7SL37P-201ENST00000490461 307 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AC106800.3-201ENST00000511389 308 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 OR52H2P-201ENST00000514607 902 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 HMGB1P42-201ENST00000532126 553 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AL121766.1-201ENST00000547436 487 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.92□□□□□ -1.46
CNOT4O95628 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.92□□□□□ -1.46
CNOT4O95628 AL133241.1-201ENST00000556832 487 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC006362.1-201ENST00000567392 174 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AC004232.1-201ENST00000571388 208 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 CTSLP2-201ENST00000580501 394 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.92□□□□□ -1.46
CNOT4O95628 AC012254.4-201ENST00000588843 273 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 AC004241.2-201ENST00000614562 444 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AC121761.2-201ENST00000617300 689 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 MIR6861-201ENST00000618657 64 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AC073593.1-201ENST00000624500 411 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 AL356121.2-201ENST00000624715 780 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 LYARP1-201ENST00000436977 1501 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 AC083837.1-201ENST00000565297 2994 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 AC117409.1-201ENST00000470499 1310 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNOT4O95628 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
CNOT4O95628 CASC19-284ENST00000642142 1868 ntBASIC5.92□□□□□ -1.46
CNOT4O95628 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 AC096992.2-201ENST00000609553 1684 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 CR381670.1-201ENST00000624291 1693 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 FANCD2P2-201ENST00000437591 1400 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 AC073365.1-203ENST00000641055 1992 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.91□□□□□ -1.46
CNOT4O95628 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.91□□□□□ -1.46
CNOT4O95628 NCLP2-201ENST00000416078 1462 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.91□□□□□ -1.46
CNOT4O95628 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CNOT4O95628 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.91□□□□□ -1.46
CNOT4O95628 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CNOT4O95628 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 RNU1-65P-201ENST00000363919 148 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.91□□□□□ -1.46
CNOT4O95628 RNU6-413P-201ENST00000384115 107 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 RNU6-244P-201ENST00000391028 104 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNOT4O95628 AL590084.2-201ENST00000401481 382 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 RNA5SP498-201ENST00000411342 120 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 FCF1P9-201ENST00000412546 282 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.91□□□□□ -1.46
CNOT4O95628 AL929472.1-201ENST00000417484 429 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 AC004074.1-201ENST00000421810 1063 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.91□□□□□ -1.46
CNOT4O95628 C1DP1-201ENST00000426049 402 ntBASIC5.91□□□□□ -1.46
CNOT4O95628 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.91□□□□□ -1.46
CNOT4O95628 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms