Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MRPL50P1-201ENST00000431951 384 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM38O00635 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 RPL6P5-201ENST00000445678 828 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM38O00635 AC008379.1-201ENST00000463655 464 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC025459.1-201ENST00000504072 156 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM38O00635 TPT1P8-201ENST00000510120 555 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM38O00635 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
TRIM38O00635 ATP5LP3-201ENST00000514223 304 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 MTCO3P27-201ENST00000514397 196 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 RNA5SP362-201ENST00000516048 118 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM38O00635 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM38O00635 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM38O00635 AC022404.1-201ENST00000555320 273 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC007225.2-201ENST00000562529 256 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC025175.1-201ENST00000606482 759 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AL050303.3-201ENST00000613704 284 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 RNA5SP439-201ENST00000617595 124 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM38O00635 MIR193BHG-214ENST00000641765 509 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 AC008432.1-201ENST00000615912 1320 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM38O00635 AL445523.1-201ENST00000451184 1362 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.88□□□□□ -1.47
TRIM38O00635 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM38O00635 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM38O00635 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
TRIM38O00635 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM38O00635 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM38O00635 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM38O00635 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM38O00635 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 MIR375-201ENST00000362103 64 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 OR7E101P-201ENST00000400428 513 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 MTND4P13-201ENST00000402078 1023 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AL391361.1-201ENST00000405580 489 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 RN7SKP278-201ENST00000410504 342 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 UBE2V1P11-201ENST00000411559 285 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 Z93019.1-201ENST00000416450 973 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 ZNF885P-201ENST00000420174 1098 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AC093155.2-201ENST00000420734 937 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 OR6K4P-201ENST00000423179 955 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 BRWD1P3-201ENST00000428816 390 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 MTCYBP21-201ENST00000443300 1113 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 HSPE1P22-201ENST00000456856 327 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 PSMC1P13-201ENST00000458195 985 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AC021205.1-201ENST00000468797 348 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 SNRPCP3-201ENST00000474888 476 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AC107398.1-201ENST00000486904 505 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 AC093801.2-201ENST00000503966 1050 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 RN7SKP141-201ENST00000516167 338 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 RNU6-1308P-201ENST00000516817 103 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 CYCSP22-201ENST00000517555 339 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AP003355.1-201ENST00000518956 587 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM38O00635 TPM3P3-201ENST00000521343 354 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 MTND2P38-201ENST00000522536 667 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AP001372.4-201ENST00000524889 472 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM38O00635 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM38O00635 AC051619.2-201ENST00000559063 397 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
TRIM38O00635 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 AC027449.1-201ENST00000608890 407 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 AL021918.2-201ENST00000613415 194 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM38O00635 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.87□□□□□ -1.47
TRIM38O00635 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.87□□□□□ -1.47
TRIM38O00635 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM38O00635 VPS35P1-201ENST00000563400 1518 ntBASIC5.87□□□□□ -1.47
TRIM38O00635 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms