Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TREX1Q9NSU2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.15□□□□□ -1.58
TREX1Q9NSU2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TREX1Q9NSU2 TTC39DP-201ENST00000416781 1688 ntBASIC5.15□□□□□ -1.58
TREX1Q9NSU2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.15□□□□□ -1.58
TREX1Q9NSU2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.15□□□□□ -1.58
TREX1Q9NSU2 MTCO1P46-201ENST00000451639 1491 ntBASIC5.15□□□□□ -1.58
TREX1Q9NSU2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.15□□□□□ -1.58
TREX1Q9NSU2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TREX1Q9NSU2 PANDAR-201ENST00000629595 1506 ntBASIC5.15□□□□□ -1.58
TREX1Q9NSU2 AL035079.1-201ENST00000405210 287 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AL389925.1-201ENST00000432257 728 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 RPL12P11-201ENST00000439970 501 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AL391987.1-201ENST00000441025 200 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 TCEA1P3-201ENST00000443005 880 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AC024558.1-201ENST00000505008 528 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 BX510359.5-201ENST00000515651 304 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AL049779.2-201ENST00000553847 315 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 AC073869.10-201ENST00000642016 354 ntBASIC5.15□□□□□ -1.59
TREX1Q9NSU2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TREX1Q9NSU2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 RN7SKP162-201ENST00000363605 345 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 NPM1P4-201ENST00000414095 812 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AL139148.1-201ENST00000427122 680 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 COX6CP13-201ENST00000428703 226 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 UBA52P7-201ENST00000486088 380 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 IGLVIV-64-201ENST00000518581 301 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AC024940.3-201ENST00000538551 316 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AC008126.1-201ENST00000549019 480 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 AC002069.2-201ENST00000603580 883 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 BX005214.3-202ENST00000619809 325 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.14□□□□□ -1.59
TREX1Q9NSU2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.14□□□□□ -1.59
TREX1Q9NSU2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AC104623.2-202ENST00000623477 4002 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AC011493.1-201ENST00000596753 1632 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 SNORA2.3-201ENST00000383920 135 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TREX1Q9NSU2 OR52B5P-201ENST00000435337 951 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 MTND6P5-201ENST00000448266 512 ntBASIC5.13□□□□□ -1.59
TREX1Q9NSU2 NPM1P19-201ENST00000450070 712 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms