Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPL7P4-203ENST00000430239 730 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 RPL36AP53-201ENST00000432891 316 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AC244505.2-201ENST00000435089 759 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-CQ95604 NDUFA5P7-201ENST00000452914 242 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 MEMO1P3-201ENST00000459811 302 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 NDUFS5P2-201ENST00000484004 306 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 SUMO2P17-201ENST00000504438 285 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 RNU6-123P-201ENST00000516163 102 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-CQ95604 IGLVIV-59-201ENST00000520218 250 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 AC008429.2-201ENST00000523057 864 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-CQ95604 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.8□□□□□ -1.16
HLA-CQ95604 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
HLA-CQ95604 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-CQ95604 RPL3P13-201ENST00000550415 216 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC7.8□□□□□ -1.16
HLA-CQ95604 SS18L2P2-201ENST00000583960 235 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AC005518.2-201ENST00000603254 282 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AC124303.1-201ENST00000605703 360 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AL451049.1-201ENST00000608672 497 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-CQ95604 AC009248.2-201ENST00000619826 254 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-CQ95604 MIR1910-201ENST00000636955 80 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 OR7E161P-202ENST00000641994 1033 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 LRRC37A12P-201ENST00000454917 1801 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 TMEM144-201ENST00000296529 3442 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-CQ95604 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
HLA-CQ95604 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-CQ95604 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-CQ95604 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-CQ95604 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
HLA-CQ95604 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-CQ95604 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
HLA-CQ95604 AC011453.1-201ENST00000597619 2239 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
HLA-CQ95604 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
HLA-CQ95604 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
HLA-CQ95604 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-CQ95604 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-CQ95604 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-CQ95604 AC005294.1-201ENST00000355509 281 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 Y_RNA.133-201ENST00000363428 110 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AL162578.1-201ENST00000406202 378 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 VDAC1P10-201ENST00000416715 891 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 MTATP6P18-201ENST00000417994 673 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-CQ95604 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.79□□□□□ -1.16
HLA-CQ95604 AL589872.1-201ENST00000426602 288 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC7.79□□□□□ -1.16
HLA-CQ95604 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-CQ95604 AC083855.1-201ENST00000440041 258 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 RPL17P49-201ENST00000443728 411 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 RPL7P59-201ENST00000447700 943 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 MTCO1P27-201ENST00000448269 226 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.79□□□□□ -1.16
HLA-CQ95604 AC013356.1-201ENST00000489027 564 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 GAPDHP61-201ENST00000507324 1005 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-CQ95604 AC006499.2-201ENST00000513470 337 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 SNORD60.2-201ENST00000516883 86 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-CQ95604 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.79□□□□□ -1.16
HLA-CQ95604 AP001803.1-201ENST00000525668 147 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.79□□□□□ -1.16
HLA-CQ95604 OR5B19P-201ENST00000531766 928 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 NMNAT1P1-201ENST00000554095 876 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-CQ95604 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-CQ95604 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-CQ95604 AC008966.2-201ENST00000606157 453 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 MIR98-201ENST00000606724 119 ntBASIC7.79□□□□□ -1.16
HLA-CQ95604 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.79□□□□□ -1.16
HLA-CQ95604 RNU6-87P-201ENST00000607561 108 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms