Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.29□□□□□ -1.4
YBX1P67809 RPL12P7-201ENST00000493832 494 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.29□□□□□ -1.4
YBX1P67809 AC018645.1-201ENST00000505003 109 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AC083906.1-201ENST00000509298 406 ntBASIC6.29□□□□□ -1.4
YBX1P67809 CUL4AP1-201ENST00000514750 1863 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.29□□□□□ -1.4
YBX1P67809 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.29□□□□□ -1.4
YBX1P67809 ADI1P3-201ENST00000549509 470 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AL162632.2-201ENST00000553933 399 ntBASIC6.29□□□□□ -1.4
YBX1P67809 HIGD1AP17-201ENST00000554576 276 ntBASIC6.29□□□□□ -1.4
YBX1P67809 RPS3AP4-201ENST00000555161 764 ntBASIC6.29□□□□□ -1.4
YBX1P67809 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.29□□□□□ -1.4
YBX1P67809 NMNAT1P5-201ENST00000559657 841 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.29□□□□□ -1.4
YBX1P67809 MIR3157-201ENST00000578688 85 ntBASIC6.29□□□□□ -1.4
YBX1P67809 MTND1P15-201ENST00000579262 949 ntBASIC6.29□□□□□ -1.4
YBX1P67809 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 MIR4271-201ENST00000582451 67 ntBASIC6.29□□□□□ -1.4
YBX1P67809 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 WISP1-OT1-201ENST00000602893 642 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AC012175.1-201ENST00000603755 531 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AC096553.1-201ENST00000605169 829 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.29□□□□□ -1.4
YBX1P67809 AC016769.4-201ENST00000616893 535 ntBASIC6.29□□□□□ -1.4
YBX1P67809 AC126175.1-201ENST00000617041 758 ntBASIC6.29□□□□□ -1.4
YBX1P67809 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 AC068213.1-201ENST00000625124 226 ntBASIC6.29□□□□□ -1.4
YBX1P67809 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.29□□□□□ -1.4
YBX1P67809 SEPT14P19-203ENST00000633205 211 ntBASIC6.29□□□□□ -1.4
YBX1P67809 SAMMSON-209ENST00000641222 1100 ntBASIC6.29□□□□□ -1.4
YBX1P67809 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 ICE2P1-201ENST00000512800 1849 ntBASIC6.29□□□□□ -1.4
YBX1P67809 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
YBX1P67809 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.29□□□□□ -1.4
YBX1P67809 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
YBX1P67809 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
YBX1P67809 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
YBX1P67809 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
YBX1P67809 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
YBX1P67809 ZNF101P1-201ENST00000435701 1720 ntBASIC6.28□□□□□ -1.4
YBX1P67809 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
YBX1P67809 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
YBX1P67809 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
YBX1P67809 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
YBX1P67809 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
YBX1P67809 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
YBX1P67809 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
YBX1P67809 RNU1-87P-201ENST00000363727 170 ntBASIC6.28□□□□□ -1.4
YBX1P67809 RNU1-84P-201ENST00000365447 164 ntBASIC6.28□□□□□ -1.4
YBX1P67809 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
YBX1P67809 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.28□□□□□ -1.4
YBX1P67809 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
YBX1P67809 MRPS6P2-201ENST00000381143 370 ntBASIC6.28□□□□□ -1.4
YBX1P67809 RNU1-46P-201ENST00000384425 164 ntBASIC6.28□□□□□ -1.4
YBX1P67809 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
YBX1P67809 SNORA40.2-201ENST00000390847 128 ntBASIC6.28□□□□□ -1.4
YBX1P67809 MRPS21P5-201ENST00000417885 231 ntBASIC6.28□□□□□ -1.4
YBX1P67809 IPPKP1-201ENST00000422501 768 ntBASIC6.28□□□□□ -1.4
YBX1P67809 AC083862.1-201ENST00000427378 1242 ntBASIC6.28□□□□□ -1.4
YBX1P67809 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.28□□□□□ -1.4
YBX1P67809 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.28□□□□□ -1.4
YBX1P67809 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.28□□□□□ -1.4
YBX1P67809 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.28□□□□□ -1.4
YBX1P67809 GTF3AP5-201ENST00000442645 697 ntBASIC6.28□□□□□ -1.4
YBX1P67809 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.28□□□□□ -1.4
YBX1P67809 RAB28P3-201ENST00000448325 597 ntBASIC6.28□□□□□ -1.4
YBX1P67809 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.28□□□□□ -1.4
YBX1P67809 SEPT7P3-201ENST00000455017 621 ntBASIC6.28□□□□□ -1.4
YBX1P67809 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.28□□□□□ -1.4
YBX1P67809 AC107015.1-201ENST00000466902 747 ntBASIC6.28□□□□□ -1.4
YBX1P67809 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.28□□□□□ -1.4
YBX1P67809 RN7SL413P-201ENST00000482700 297 ntBASIC6.28□□□□□ -1.4
YBX1P67809 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
YBX1P67809 AC021006.1-201ENST00000489849 553 ntBASIC6.28□□□□□ -1.4
YBX1P67809 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.28□□□□□ -1.4
YBX1P67809 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
YBX1P67809 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.28□□□□□ -1.4
YBX1P67809 AC004069.2-201ENST00000505438 1114 ntBASIC6.28□□□□□ -1.4
YBX1P67809 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.28□□□□□ -1.4
YBX1P67809 MTATP6P22-201ENST00000507369 598 ntBASIC6.28□□□□□ -1.4
YBX1P67809 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.28□□□□□ -1.4
YBX1P67809 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.28□□□□□ -1.4
YBX1P67809 GTF2F2P1-201ENST00000511083 675 ntBASIC6.28□□□□□ -1.4
YBX1P67809 RN7SKP183-201ENST00000517169 324 ntBASIC6.28□□□□□ -1.4
YBX1P67809 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.28□□□□□ -1.4
YBX1P67809 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms