Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.15□□□□□ -1.58
SHMT2P34897 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SHMT2P34897 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHMT2P34897 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SHMT2P34897 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
SHMT2P34897 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.15□□□□□ -1.58
SHMT2P34897 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SHMT2P34897 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
SHMT2P34897 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SHMT2P34897 AL590763.1-201ENST00000398297 1545 ntBASIC5.15□□□□□ -1.58
SHMT2P34897 OR9K1P-201ENST00000326513 941 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.15□□□□□ -1.59
SHMT2P34897 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.15□□□□□ -1.59
SHMT2P34897 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 AC017019.1-201ENST00000426129 261 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.15□□□□□ -1.59
SHMT2P34897 OR52B5P-201ENST00000435337 951 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.15□□□□□ -1.59
SHMT2P34897 AC090804.1-201ENST00000448870 490 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 PRPF38AP1-201ENST00000451976 933 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC058823.1-201ENST00000485315 474 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.15□□□□□ -1.59
SHMT2P34897 MYL12BP2-201ENST00000503948 512 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 HIGD1AP14-201ENST00000507617 282 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.15□□□□□ -1.59
SHMT2P34897 HMGN1P9-201ENST00000515212 298 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.15□□□□□ -1.59
SHMT2P34897 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.15□□□□□ -1.59
SHMT2P34897 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.15□□□□□ -1.59
SHMT2P34897 ADAM3B-201ENST00000569937 840 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 MTCYBP13-201ENST00000578634 1093 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 PRPF19P1-201ENST00000584766 898 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.15□□□□□ -1.59
SHMT2P34897 AL356608.1-201ENST00000610034 820 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC099654.6-201ENST00000636487 512 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 AC132825.8-201ENST00000640783 297 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 OR52B5P-202ENST00000641118 1110 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 SAMMSON-227ENST00000642114 1199 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.15□□□□□ -1.59
SHMT2P34897 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SHMT2P34897 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHMT2P34897 AC003973.3-201ENST00000624863 2822 ntBASIC5.15□□□□□ -1.59
SHMT2P34897 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
SHMT2P34897 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 RN7SKP153-201ENST00000365026 316 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC007618.1-201ENST00000366455 732 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.14□□□□□ -1.59
SHMT2P34897 NANOGP4-201ENST00000427230 913 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC124944.2-201ENST00000429866 1242 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 AC090018.1-201ENST00000434369 367 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 FAR2P1-206ENST00000449736 709 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC104634.1-201ENST00000452720 462 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC026348.1-201ENST00000462549 1053 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC021660.1-201ENST00000465006 554 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC015864.1-201ENST00000496512 544 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.14□□□□□ -1.59
SHMT2P34897 RPS4XP20-201ENST00000505751 772 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC016559.2-201ENST00000510759 359 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 AC027369.5-201ENST00000533838 755 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.14□□□□□ -1.59
SHMT2P34897 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.14□□□□□ -1.59
SHMT2P34897 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHMT2P34897 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.14□□□□□ -1.59
SHMT2P34897 AC040958.1-201ENST00000561102 201 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC127024.5-201ENST00000580085 462 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 OR51C1P-201ENST00000608504 942 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC126915.2-201ENST00000610957 190 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.14□□□□□ -1.59
SHMT2P34897 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.14□□□□□ -1.59
SHMT2P34897 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC090527.3-201ENST00000619041 548 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 AC091932.2-201ENST00000623014 291 ntBASIC5.14□□□□□ -1.59
SHMT2P34897 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHMT2P34897 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms