Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 RNA5SP249-201ENST00000516127 99 ntBASIC4.35□□□□□ -1.71
TMEM235A6NFC5 AC090022.1-201ENST00000546569 311 ntBASIC4.35□□□□□ -1.71
TMEM235A6NFC5 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 BLZF2P-201ENST00000553776 1130 ntBASIC4.35□□□□□ -1.71
TMEM235A6NFC5 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 AC079315.1-201ENST00000602952 623 ntBASIC4.35□□□□□ -1.71
TMEM235A6NFC5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 AL591926.1-201ENST00000620542 217 ntBASIC4.35□□□□□ -1.71
TMEM235A6NFC5 AC016542.2-201ENST00000624201 619 ntBASIC4.35□□□□□ -1.71
TMEM235A6NFC5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 CASC19-221ENST00000641309 1382 ntBASIC4.35□□□□□ -1.71
TMEM235A6NFC5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM235A6NFC5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 RPL34P3-201ENST00000421454 338 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 RPS29P10-201ENST00000439197 166 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 PCNPP2-201ENST00000441651 455 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 RN7SL51P-201ENST00000468230 285 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AC138866.2-201ENST00000508650 584 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 RNA5SP373-201ENST00000517271 95 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 RPL23AP53-201ENST00000521854 457 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 HMGB1P40-201ENST00000525121 540 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 NDUFB4P11-201ENST00000560510 395 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AC067773.1-201ENST00000603284 1094 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 CU639417.4-201ENST00000623928 207 ntBASIC4.34□□□□□ -1.71
TMEM235A6NFC5 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM235A6NFC5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TMEM235A6NFC5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.34□□□□□ -1.72
TMEM235A6NFC5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.34□□□□□ -1.72
TMEM235A6NFC5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AC107068.1-201ENST00000563286 4218 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 SCN1A-220ENST00000641603 12506 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AL078595.2-201ENST00000605309 1780 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 RN7SKP275-201ENST00000364626 301 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 RPS26P4-201ENST00000431743 355 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AL161722.1-201ENST00000446972 1032 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AC004980.3-201ENST00000447046 365 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AC092349.1-201ENST00000504903 310 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 RN7SKP183-201ENST00000517169 324 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 AC005868.1-201ENST00000536421 331 ntBASIC4.33□□□□□ -1.72
TMEM235A6NFC5 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.33□□□□□ -1.72
TMEM235A6NFC5 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms