Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC114947.2-201ENST00000565748 2125 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 RN7SKP160-201ENST00000363804 340 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 U3.25-201ENST00000391209 220 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 CHEK2P5-201ENST00000423877 246 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 HMGN2P27-201ENST00000427352 270 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC020779.1-201ENST00000478757 796 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 SIAH1P1-201ENST00000479411 923 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 OR4A46P-201ENST00000527255 933 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC006349.1-201ENST00000555526 235 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 BNIP3P35-201ENST00000604530 490 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 RPSAP73-201ENST00000614820 330 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 MIR6837-201ENST00000620884 64 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 CASC19-264ENST00000641912 1184 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AC004817.4-201ENST00000602396 3625 ntBASIC5.17□□□□□ -1.58
TREX1Q9NSU2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TREX1Q9NSU2 CASC19-221ENST00000641309 1382 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AL450345.1-202ENST00000605741 3881 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 MIR323A-201ENST00000362199 86 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AL512422.1-201ENST00000407033 553 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 RN7SKP59-201ENST00000410520 314 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 RPL35AP24-201ENST00000413846 330 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 CFL1P1-202ENST00000432948 411 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 CYCSP24-201ENST00000445119 316 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 RN7SL174P-201ENST00000475578 289 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 NPM1P28-201ENST00000492269 840 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 RN7SL101P-201ENST00000496350 279 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AC104109.1-201ENST00000498563 436 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 GTF2F2P1-201ENST00000511083 675 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 IGKV2-18-201ENST00000522607 343 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 MIR4310-201ENST00000582950 57 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 IMMP1LP3-201ENST00000604197 224 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AC073575.2-201ENST00000614212 627 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 AL049767.1-202ENST00000637826 242 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 MTCO1P15-201ENST00000529569 1526 ntBASIC5.16□□□□□ -1.58
TREX1Q9NSU2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TREX1Q9NSU2 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms