Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC7.82□□□□□ -1.16
HLA-CQ95604 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-CQ95604 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-CQ95604 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 MTND4P14-201ENST00000435799 1354 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-CQ95604 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC7.82□□□□□ -1.16
HLA-CQ95604 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 OFD1P5Y-201ENST00000447585 2590 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
HLA-CQ95604 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
HLA-CQ95604 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
HLA-CQ95604 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 OR52E6-202ENST00000379946 954 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 Y_RNA.459-201ENST00000384251 102 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 RPA3-203ENST00000401447 414 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-CQ95604 RPS4XP8-201ENST00000402039 771 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 AC009161.1-201ENST00000417306 376 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-CQ95604 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-CQ95604 RN7SL325P-201ENST00000460434 283 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-CQ95604 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-CQ95604 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-CQ95604 RNA5SP518-201ENST00000515957 119 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 RNU6-1003P-201ENST00000517099 105 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-CQ95604 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 SUB1P2-201ENST00000556401 297 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-CQ95604 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.81□□□□□ -1.16
HLA-CQ95604 AL356585.4-201ENST00000623078 1229 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 CCT8P1-201ENST00000413611 1657 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 CASC19-221ENST00000641309 1382 ntBASIC7.81□□□□□ -1.16
HLA-CQ95604 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-CQ95604 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
HLA-CQ95604 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-CQ95604 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 SGK1-201ENST00000237305 2401 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-CQ95604 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-CQ95604 RNA5SP188-201ENST00000362916 129 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 Y_RNA.146-201ENST00000363549 102 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 RNU6-74P-201ENST00000384235 107 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AL450338.1-201ENST00000407987 512 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 RNU2-62P-201ENST00000410868 191 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 RN7SKP58-201ENST00000411010 305 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 MTND3P8-201ENST00000412909 339 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-CQ95604 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.8□□□□□ -1.16
HLA-CQ95604 AL353678.1-201ENST00000422735 741 ntBASIC7.8□□□□□ -1.16
HLA-CQ95604 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms