Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 RN7SL563P-201ENST00000481233 298 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC093824.1-201ENST00000508796 343 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC239860.2-201ENST00000525886 270 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AP001189.2-201ENST00000527320 189 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC137768.1-201ENST00000549998 553 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 NUTF2P2-201ENST00000551207 384 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AL355076.3-201ENST00000555838 587 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC018558.5-201ENST00000565840 952 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 EEF1B2P1-201ENST00000567221 672 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 MIR3689F-201ENST00000579617 66 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 SS18L2P2-201ENST00000583960 235 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 C8orf59P2-201ENST00000603441 271 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC090578.1-201ENST00000604955 591 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC005084.1-201ENST00000605160 304 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 Y_RNA.804-201ENST00000615262 101 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AL121890.2-201ENST00000617644 465 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC079456.1-201ENST00000624010 480 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AP000648.2-201ENST00000624182 404 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AP005264.7-201ENST00000625003 745 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC016582.3-206ENST00000636547 207 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 PARP4P1-201ENST00000435945 2337 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 CCT8P1-201ENST00000413611 1657 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AL354685.2-201ENST00000448218 1447 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC096992.2-201ENST00000609553 1684 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC008033.1-201ENST00000216407 1162 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AL590002.1-201ENST00000406554 418 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC068533.2-201ENST00000411872 306 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AL139413.1-201ENST00000421309 217 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 MTCO3P1-205ENST00000422088 832 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 MTND1P14-201ENST00000427400 950 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 SKP1P3-201ENST00000429280 487 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC244505.5-201ENST00000443639 207 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 RPL31P44-201ENST00000447680 377 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 Z99127.3-201ENST00000448158 395 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 NFU1P2-201ENST00000448700 469 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC104306.1-201ENST00000449702 371 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 DNAJB5P1-201ENST00000454004 806 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 TRBV8-2-201ENST00000475637 270 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC092989.1-201ENST00000481235 277 ntBASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.05□□□□□ -1.44
SHISA3A0PJX4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms