Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 TRIM51DP-201ENST00000529746 596 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 NANOGNBP2-201ENST00000544753 553 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC112187.2-201ENST00000604345 283 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC021646.1-201ENST00000605469 484 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
LRCH3Q96II8 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 AL357556.1-201ENST00000421884 1388 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 CASC19-221ENST00000641309 1382 ntBASIC8.22□□□□□ -1.09
LRCH3Q96II8 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
LRCH3Q96II8 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
LRCH3Q96II8 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.21□□□□□ -1.09
LRCH3Q96II8 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LRCH3Q96II8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC8.21□□□□□ -1.09
LRCH3Q96II8 ABCF2P1-201ENST00000465687 1867 ntBASIC8.21□□□□□ -1.09
LRCH3Q96II8 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.21□□□□□ -1.09
LRCH3Q96II8 AC127070.5-201ENST00000623177 2104 ntBASIC8.21□□□□□ -1.09
LRCH3Q96II8 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
LRCH3Q96II8 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
LRCH3Q96II8 NSRP1P1-201ENST00000444067 1693 ntBASIC8.21□□□□□ -1.09
LRCH3Q96II8 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
LRCH3Q96II8 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
LRCH3Q96II8 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LRCH3Q96II8 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
LRCH3Q96II8 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LRCH3Q96II8 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
LRCH3Q96II8 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
LRCH3Q96II8 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 RN7SKP44-201ENST00000363602 316 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 RNVU1-15-201ENST00000384476 165 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 MIR525-201ENST00000384978 85 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 PDCL3P5-201ENST00000398028 722 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 VIM2P-201ENST00000402383 1294 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 SPA17P1-201ENST00000416656 452 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC023512.1-201ENST00000444513 499 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 CALM1P2-201ENST00000452941 448 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 SRP68P2-201ENST00000456184 254 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC112206.1-201ENST00000468416 477 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 RN7SL418P-201ENST00000473031 287 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 CDH12P2-201ENST00000504393 298 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC048346.1-201ENST00000510247 144 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 RNU6-789P-201ENST00000517105 102 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 RNU6-988P-201ENST00000519081 107 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 TOMM20P1-201ENST00000534518 427 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 SNRPGP18-201ENST00000553000 214 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 AL589863.1-201ENST00000595383 631 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC010323.2-201ENST00000596405 594 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC011497.2-201ENST00000600255 639 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC068790.5-201ENST00000602741 355 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC007938.3-201ENST00000604965 623 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC087623.4-201ENST00000606593 695 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC093635.1-201ENST00000609028 555 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 AL390240.1-201ENST00000612950 384 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 DLEU1_2.1-201ENST00000617920 342 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC022418.1-201ENST00000624118 445 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
LRCH3Q96II8 MRPS17P1-201ENST00000596009 3130 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
LRCH3Q96II8 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LRCH3Q96II8 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
LRCH3Q96II8 AC117409.1-201ENST00000470499 1310 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
LRCH3Q96II8 MAPK10-333ENST00000641607 2481 ntBASIC8.21□□□□□ -1.1
LRCH3Q96II8 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
LRCH3Q96II8 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
LRCH3Q96II8 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms