Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.46□□□□□ -1.7
USF2Q15853 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF2Q15853 UGT2B26P-201ENST00000508672 1613 ntBASIC4.46□□□□□ -1.7
USF2Q15853 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.46□□□□□ -1.7
USF2Q15853 AC235565.1-201ENST00000456962 1325 ntBASIC4.46□□□□□ -1.7
USF2Q15853 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 CASC19-281ENST00000642118 1554 ntBASIC4.45□□□□□ -1.7
USF2Q15853 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USF2Q15853 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 RNGTTP1-201ENST00000420965 728 ntBASIC4.45□□□□□ -1.7
USF2Q15853 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 GAPDHP34-201ENST00000432112 823 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 AL359265.1-201ENST00000440296 795 ntBASIC4.45□□□□□ -1.7
USF2Q15853 ELOCP10-201ENST00000440624 327 ntBASIC4.45□□□□□ -1.7
USF2Q15853 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.45□□□□□ -1.7
USF2Q15853 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 OR7E116P-201ENST00000448529 957 ntBASIC4.45□□□□□ -1.7
USF2Q15853 MEMO1P4-201ENST00000453590 386 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AC093166.4-201ENST00000457867 318 ntBASIC4.45□□□□□ -1.7
USF2Q15853 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 RPSAP39-201ENST00000467439 883 ntBASIC4.45□□□□□ -1.7
USF2Q15853 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 GAPDHP62-201ENST00000515313 990 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AC021146.10-201ENST00000515628 706 ntBASIC4.45□□□□□ -1.7
USF2Q15853 NPM1P52-201ENST00000518264 846 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.45□□□□□ -1.7
USF2Q15853 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.45□□□□□ -1.7
USF2Q15853 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.45□□□□□ -1.7
USF2Q15853 RPA2P1-201ENST00000556557 721 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.45□□□□□ -1.7
USF2Q15853 OR1F2P-201ENST00000570470 933 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 MIR4776-2-201ENST00000580204 80 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USF2Q15853 ELOCP34-201ENST00000604436 327 ntBASIC4.45□□□□□ -1.7
USF2Q15853 NANOGP3-201ENST00000605855 286 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AC245014.3-201ENST00000618589 347 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AL035661.1-201ENST00000620459 1144 ntBASIC4.45□□□□□ -1.7
USF2Q15853 AL591926.1-201ENST00000620542 217 ntBASIC4.45□□□□□ -1.7
USF2Q15853 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF2Q15853 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
USF2Q15853 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.45□□□□□ -1.7
USF2Q15853 AC117409.1-201ENST00000470499 1310 ntBASIC4.45□□□□□ -1.7
USF2Q15853 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
USF2Q15853 OR10AB1P-202ENST00000641219 1686 ntBASIC4.45□□□□□ -1.7
USF2Q15853 BRAFP1-201ENST00000445336 2703 ntBASIC4.44□□□□□ -1.7
USF2Q15853 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USF2Q15853 AC007938.2-201ENST00000604666 2634 ntBASIC4.44□□□□□ -1.7
USF2Q15853 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.44□□□□□ -1.7
USF2Q15853 MAPK10-320ENST00000641462 6696 ntBASIC4.44□□□□□ -1.7
USF2Q15853 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
USF2Q15853 LINC01109-201ENST00000603837 3081 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC092681.1-201ENST00000297369 291 ntBASIC4.44□□□□□ -1.7
USF2Q15853 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USF2Q15853 RNFT1P3-201ENST00000340898 1052 ntBASIC4.44□□□□□ -1.7
USF2Q15853 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.44□□□□□ -1.7
USF2Q15853 RNU6-697P-201ENST00000363348 107 ntBASIC4.44□□□□□ -1.7
USF2Q15853 RN7SKP171-201ENST00000364417 303 ntBASIC4.44□□□□□ -1.7
USF2Q15853 UBBP2-201ENST00000376781 231 ntBASIC4.44□□□□□ -1.7
USF2Q15853 RNU1-136P-201ENST00000384181 164 ntBASIC4.44□□□□□ -1.7
USF2Q15853 AC019205.1-201ENST00000421830 730 ntBASIC4.44□□□□□ -1.7
USF2Q15853 OR10T1P-201ENST00000424327 947 ntBASIC4.44□□□□□ -1.7
USF2Q15853 RPL23AP4-201ENST00000427757 463 ntBASIC4.44□□□□□ -1.7
USF2Q15853 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.44□□□□□ -1.7
USF2Q15853 AL389925.1-201ENST00000432257 728 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms