Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC090888.3-201ENST00000558917 509 ntBASIC5.18□□□□□ -1.58
CLPTM1O96005 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.18□□□□□ -1.58
CLPTM1O96005 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CLPTM1O96005 GARSP1-201ENST00000570895 719 ntBASIC5.18□□□□□ -1.58
CLPTM1O96005 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.18□□□□□ -1.58
CLPTM1O96005 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.18□□□□□ -1.58
CLPTM1O96005 AL138895.2-201ENST00000603019 178 ntBASIC5.18□□□□□ -1.58
CLPTM1O96005 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLPTM1O96005 uc_338.7-201ENST00000621834 124 ntBASIC5.18□□□□□ -1.58
CLPTM1O96005 AL136228.1-201ENST00000622221 319 ntBASIC5.18□□□□□ -1.58
CLPTM1O96005 AL359742.1-201ENST00000622497 540 ntBASIC5.18□□□□□ -1.58
CLPTM1O96005 AC080188.3-201ENST00000624842 748 ntBASIC5.18□□□□□ -1.58
CLPTM1O96005 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.18□□□□□ -1.58
CLPTM1O96005 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLPTM1O96005 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.18□□□□□ -1.58
CLPTM1O96005 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLPTM1O96005 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLPTM1O96005 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
CLPTM1O96005 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLPTM1O96005 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.18□□□□□ -1.58
CLPTM1O96005 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.18□□□□□ -1.58
CLPTM1O96005 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLPTM1O96005 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLPTM1O96005 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CLPTM1O96005 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLPTM1O96005 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLPTM1O96005 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CLPTM1O96005 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.17□□□□□ -1.58
CLPTM1O96005 RNU6-386P-201ENST00000362650 107 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLPTM1O96005 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 AL096711.1-201ENST00000404780 554 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 MRPL53P1-201ENST00000414323 319 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AC013268.2-201ENST00000420753 337 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.17□□□□□ -1.58
CLPTM1O96005 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AC023141.8-201ENST00000442554 208 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.17□□□□□ -1.58
CLPTM1O96005 TRIM60P16-201ENST00000444048 694 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 CYCSP24-201ENST00000445119 316 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 OR7E116P-201ENST00000448529 957 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AC005077.1-201ENST00000449226 375 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 TRBV8-1-201ENST00000481590 279 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 RN7SL591P-201ENST00000496150 292 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.17□□□□□ -1.58
CLPTM1O96005 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.17□□□□□ -1.58
CLPTM1O96005 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 OR5H7P-201ENST00000514084 930 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 SNORA70.17-201ENST00000516449 133 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.17□□□□□ -1.58
CLPTM1O96005 BNIP3P1-201ENST00000547295 580 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AC007956.1-201ENST00000555623 542 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 RPA2P1-201ENST00000556557 721 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.17□□□□□ -1.58
CLPTM1O96005 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.17□□□□□ -1.58
CLPTM1O96005 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.17□□□□□ -1.58
CLPTM1O96005 AC108673.3-201ENST00000609183 335 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.17□□□□□ -1.58
CLPTM1O96005 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 MIR6778-201ENST00000617912 73 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AC245014.3-201ENST00000618589 347 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.17□□□□□ -1.58
CLPTM1O96005 MIR1910-201ENST00000636955 80 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.17□□□□□ -1.58
CLPTM1O96005 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CLPTM1O96005 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.17□□□□□ -1.58
CLPTM1O96005 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLPTM1O96005 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CLPTM1O96005 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.16□□□□□ -1.58
CLPTM1O96005 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLPTM1O96005 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLPTM1O96005 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLPTM1O96005 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLPTM1O96005 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.16□□□□□ -1.58
CLPTM1O96005 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CLPTM1O96005 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.16□□□□□ -1.58
CLPTM1O96005 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.16□□□□□ -1.58
CLPTM1O96005 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CLPTM1O96005 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.16□□□□□ -1.58
CLPTM1O96005 OR6K3-202ENST00000368146 996 ntBASIC5.16□□□□□ -1.58
CLPTM1O96005 PPIAP9-201ENST00000403866 498 ntBASIC5.16□□□□□ -1.58
CLPTM1O96005 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.16□□□□□ -1.58
CLPTM1O96005 RNA5SP487-201ENST00000410186 122 ntBASIC5.16□□□□□ -1.58
CLPTM1O96005 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.16□□□□□ -1.58
CLPTM1O96005 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.16□□□□□ -1.58
CLPTM1O96005 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.16□□□□□ -1.58
CLPTM1O96005 RPS4XP5-201ENST00000419038 768 ntBASIC5.16□□□□□ -1.58
CLPTM1O96005 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.16□□□□□ -1.58
CLPTM1O96005 AC066692.1-201ENST00000421721 457 ntBASIC5.16□□□□□ -1.58
CLPTM1O96005 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.16□□□□□ -1.58
CLPTM1O96005 AC012519.1-201ENST00000424588 610 ntBASIC5.16□□□□□ -1.58
CLPTM1O96005 RIMKLBP2-201ENST00000424737 654 ntBASIC5.16□□□□□ -1.58
CLPTM1O96005 AL390879.2-203ENST00000426943 1121 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms