Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 FTOP1-201ENST00000419363 861 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AL606752.1-201ENST00000435442 666 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 ARMC4P1-201ENST00000438905 707 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC004865.1-201ENST00000442276 1003 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 TPT1P14-201ENST00000448018 505 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 PDSS1P2-201ENST00000449397 678 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 PSPHP1-201ENST00000450062 261 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC093799.1-201ENST00000452411 499 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 ARPC3P2-201ENST00000457786 533 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 RPS18P13-201ENST00000461260 454 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 RN7SL508P-201ENST00000464472 303 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC146507.1-201ENST00000468335 354 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC021205.1-201ENST00000468797 348 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AP000797.1-201ENST00000478870 387 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 RN7SL124P-201ENST00000498656 285 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC108941.1-201ENST00000502853 530 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 SNX5P1-201ENST00000505757 1041 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC046134.1-201ENST00000514454 666 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC011352.2-201ENST00000514574 1016 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 OR5BC1P-201ENST00000529327 739 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC104383.1-201ENST00000530297 370 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 UBE2FP2-201ENST00000566646 462 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC136944.5-201ENST00000573021 151 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 MIR4642-201ENST00000583943 82 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AL158211.4-201ENST00000606988 584 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AL139089.1-201ENST00000620372 975 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC138649.3-201ENST00000622154 254 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC012254.5-201ENST00000623573 478 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 MTND1P37-201ENST00000636562 264 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC011471.4-201ENST00000638271 216 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 CASC19-260ENST00000641828 2001 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 MKI67P1-201ENST00000604297 1460 ntBASIC6.07□□□□□ -1.44
SHISA3A0PJX4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.07□□□□□ -1.44
SHISA3A0PJX4 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 RNA5SP260-201ENST00000363849 111 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 RNU6-532P-201ENST00000384318 107 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 RNU4-64P-201ENST00000410795 131 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 LINC00993-201ENST00000420453 540 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 RPL7P30-201ENST00000420888 709 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 RPL23AP34-201ENST00000423483 410 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.06□□□□□ -1.44
SHISA3A0PJX4 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.06□□□□□ -1.44
SHISA3A0PJX4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms