Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 C2orf69P3-201ENST00000565542 1120 ntBASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.17■□□□□ 0.66
CSNK1G3Q9Y6M4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 AL590326.2-201ENST00000625139 305 ntBASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CSNK1G3Q9Y6M4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 AC011506.1-201ENST00000474329 610 ntBASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 AL049597.2-201ENST00000565575 961 ntBASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 AC092667.1-201ENST00000434301 2586 ntBASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G3Q9Y6M4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.14■□□□□ 0.66
CSNK1G3Q9Y6M4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSNK1G3Q9Y6M4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.14■□□□□ 0.66
CSNK1G3Q9Y6M4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSNK1G3Q9Y6M4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSNK1G3Q9Y6M4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 AL137013.1-201ENST00000432946 1228 ntBASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 SLC25A3P1-201ENST00000443844 931 ntBASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 EGLN1P1-201ENST00000531623 762 ntBASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G3Q9Y6M4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 TSPY14P-201ENST00000303979 915 ntBASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 TERF1P1-201ENST00000311003 1181 ntBASIC19.13■□□□□ 0.65
CSNK1G3Q9Y6M4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms