Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TSSC4Q9Y5U2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.32■□□□□ 0.04
TSSC4Q9Y5U2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TSSC4Q9Y5U2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TSSC4Q9Y5U2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TSSC4Q9Y5U2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TSSC4Q9Y5U2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 NIFKP9-201ENST00000419265 221 ntBASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 AC116351.2-201ENST00000606540 1585 ntBASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TSSC4Q9Y5U2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 MMP23A-201ENST00000234610 1017 ntBASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 UNC93B2-201ENST00000285383 730 ntBASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 KRT16P1-201ENST00000399124 1418 ntBASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 FAM210CP-201ENST00000445714 574 ntBASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 TSPY15P-201ENST00000457163 923 ntBASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 CR392000.1-201ENST00000624770 1228 ntBASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
TSSC4Q9Y5U2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 YBX1P10-201ENST00000444752 975 ntBASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.29■□□□□ 0.04
TSSC4Q9Y5U2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 TFP1-202ENST00000475455 1573 ntBASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 AC018553.1-201ENST00000616682 1458 ntBASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TSSC4Q9Y5U2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms