Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CDC42BPBQ9Y5S2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 IER3-202ENST00000376377 1350 ntBASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 SMG8-203ENST00000578922 2178 ntBASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 AL160286.2-201ENST00000567150 934 ntBASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 FEM1AP1-201ENST00000431297 1995 ntBASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CDC42BPBQ9Y5S2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CDC42BPBQ9Y5S2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 HCG4P8-203ENST00000443049 980 ntBASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 AC112907.2-201ENST00000448639 330 ntBASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC29.74■■■□□ 2.35
CDC42BPBQ9Y5S2 LINC01465-201ENST00000408887 1940 ntBASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC29.73■■■□□ 2.35
CDC42BPBQ9Y5S2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 CKBP1-201ENST00000565489 1086 ntBASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CDC42BPBQ9Y5S2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC29.71■■■□□ 2.35
CDC42BPBQ9Y5S2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.35
CDC42BPBQ9Y5S2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CDC42BPBQ9Y5S2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDC42BPBQ9Y5S2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDC42BPBQ9Y5S2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC29.7■■■□□ 2.35
CDC42BPBQ9Y5S2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CDC42BPBQ9Y5S2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPBQ9Y5S2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPBQ9Y5S2 KRT126P-201ENST00000549467 1181 ntBASIC29.7■■■□□ 2.34
CDC42BPBQ9Y5S2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPBQ9Y5S2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPBQ9Y5S2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
CDC42BPBQ9Y5S2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CDC42BPBQ9Y5S2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CDC42BPBQ9Y5S2 AC026310.3-201ENST00000625186 2373 ntBASIC29.69■■■□□ 2.34
CDC42BPBQ9Y5S2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC29.69■■■□□ 2.34
CDC42BPBQ9Y5S2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
CDC42BPBQ9Y5S2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC29.69■■■□□ 2.34
CDC42BPBQ9Y5S2 SPDYE13P-201ENST00000445314 798 ntBASIC29.69■■■□□ 2.34
CDC42BPBQ9Y5S2 HOMER2P1-201ENST00000455653 964 ntBASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms