Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 SMG8-203ENST00000578922 2178 ntBASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA6Q9Y5G7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 KRT16P5-201ENST00000455284 522 ntBASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHGA6Q9Y5G7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 AL353807.1-201ENST00000427475 662 ntBASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHGA6Q9Y5G7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 AL020996.1-203ENST00000536896 2307 ntBASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHGA6Q9Y5G7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms