Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB13Q9Y5F0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 YBX1P10-201ENST00000444752 975 ntBASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 AC098799.1-201ENST00000504752 800 ntBASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 AC233263.1-201ENST00000578059 224 ntBASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 AC073648.6-201ENST00000641589 218 ntBASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB13Q9Y5F0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 TSPY20P-201ENST00000450910 630 ntBASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 AC128676.1-201ENST00000454392 318 ntBASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHB13Q9Y5F0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 TREX1-205ENST00000625293 1783 ntBASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB13Q9Y5F0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 RN7SL471P-201ENST00000580476 299 ntBASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms