Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RNF6Q9Y252 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF6Q9Y252 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF6Q9Y252 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF6Q9Y252 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF6Q9Y252 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF6Q9Y252 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF6Q9Y252 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF6Q9Y252 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF6Q9Y252 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF6Q9Y252 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF6Q9Y252 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF6Q9Y252 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF6Q9Y252 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF6Q9Y252 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF6Q9Y252 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF6Q9Y252 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF6Q9Y252 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 RPS2P4-201ENST00000476944 856 ntBASIC18.39■□□□□ 0.53
RNF6Q9Y252 UNC93B4-201ENST00000505679 747 ntBASIC18.39■□□□□ 0.53
RNF6Q9Y252 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 AC060766.5-201ENST00000590539 871 ntBASIC18.39■□□□□ 0.53
RNF6Q9Y252 AL589743.5-201ENST00000616611 1050 ntBASIC18.39■□□□□ 0.53
RNF6Q9Y252 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 TREX1-205ENST00000625293 1783 ntBASIC18.39■□□□□ 0.53
RNF6Q9Y252 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF6Q9Y252 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF6Q9Y252 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF6Q9Y252 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
RNF6Q9Y252 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF6Q9Y252 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF6Q9Y252 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
RNF6Q9Y252 MCRIP2P1-201ENST00000394346 511 ntBASIC18.38■□□□□ 0.53
RNF6Q9Y252 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RNF6Q9Y252 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF6Q9Y252 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF6Q9Y252 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF6Q9Y252 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 AC008403.3-201ENST00000598924 454 ntBASIC18.37■□□□□ 0.53
RNF6Q9Y252 HLA-B-256ENST00000639848 1089 ntBASIC18.37■□□□□ 0.53
RNF6Q9Y252 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RNF6Q9Y252 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF6Q9Y252 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RNF6Q9Y252 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF6Q9Y252 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms