Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC093503.3-201ENST00000624917 2352 ntBASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHMP2BQ9UQN3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 AC005181.1-201ENST00000604782 1256 ntBASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP2BQ9UQN3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHMP2BQ9UQN3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 AC004911.1-201ENST00000416316 871 ntBASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP2BQ9UQN3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 AC026471.1-201ENST00000564629 3026 ntBASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 AC018553.1-201ENST00000616682 1458 ntBASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 AL512625.2-201ENST00000417533 625 ntBASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 LINC01465-201ENST00000408887 1940 ntBASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP2BQ9UQN3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP2BQ9UQN3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms