Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.44■□□□□ 0.38
COPS3Q9UNS2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
COPS3Q9UNS2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 AC006015.1-201ENST00000429970 570 ntBASIC17.42■□□□□ 0.38
COPS3Q9UNS2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.42■□□□□ 0.38
COPS3Q9UNS2 AC069236.1-201ENST00000604339 616 ntBASIC17.42■□□□□ 0.38
COPS3Q9UNS2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
COPS3Q9UNS2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 C2orf69P4-201ENST00000565394 541 ntBASIC17.41■□□□□ 0.38
COPS3Q9UNS2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 KRT17P1-201ENST00000399211 1546 ntBASIC17.41■□□□□ 0.38
COPS3Q9UNS2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COPS3Q9UNS2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 AC010980.2-201ENST00000587099 1412 ntBASIC17.4■□□□□ 0.38
COPS3Q9UNS2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COPS3Q9UNS2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms