Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 NUDT16P1-203ENST00000513809 620 ntBASIC20.74■□□□□ 0.91
CDH9Q9ULB4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH9Q9ULB4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 AP003071.4-201ENST00000562276 1284 ntBASIC20.73■□□□□ 0.91
CDH9Q9ULB4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH9Q9ULB4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 AC112907.3-201ENST00000577781 2400 ntBASIC20.72■□□□□ 0.91
CDH9Q9ULB4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.72■□□□□ 0.91
CDH9Q9ULB4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 HLA-A-209ENST00000638375 975 ntBASIC20.72■□□□□ 0.91
CDH9Q9ULB4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH9Q9ULB4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 AL031985.4-201ENST00000642138 673 ntBASIC20.71■□□□□ 0.91
CDH9Q9ULB4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH9Q9ULB4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CDH9Q9ULB4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CDH9Q9ULB4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.7■□□□□ 0.9
CDH9Q9ULB4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 AL355075.4-201ENST00000554988 638 ntBASIC20.7■□□□□ 0.9
CDH9Q9ULB4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 AC131212.4-201ENST00000623606 975 ntBASIC20.7■□□□□ 0.9
CDH9Q9ULB4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CDH9Q9ULB4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms