Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 AC023511.2-201ENST00000618803 211 ntBASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 AC092720.2-201ENST00000602388 1665 ntBASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.78■■□□□ 1.4
MKRN1Q9UHC7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 AL121956.5-201ENST00000625261 221 ntBASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
MKRN1Q9UHC7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 NIFKP9-201ENST00000419265 221 ntBASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 TSPY5P-201ENST00000426936 936 ntBASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MKRN1Q9UHC7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 YBX1P2-201ENST00000489612 999 ntBASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
MKRN1Q9UHC7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 KRT18P16-201ENST00000510337 1294 ntBASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MKRN1Q9UHC7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MKRN1Q9UHC7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
MKRN1Q9UHC7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.73■■□□□ 1.39
MKRN1Q9UHC7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms