Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD3Q9UBI1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD3Q9UBI1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COMMD3Q9UBI1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COMMD3Q9UBI1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
COMMD3Q9UBI1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 MIR4466-201ENST00000606121 54 ntBASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 AL161938.1-201ENST00000569833 2180 ntBASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 AC006333.2-201ENST00000607957 2099 ntBASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.2■□□□□ 0.34
COMMD3Q9UBI1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 MIR4767-201ENST00000582827 78 ntBASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 FAM21FP-204ENST00000608637 956 ntBASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COMMD3Q9UBI1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.18■□□□□ 0.34
COMMD3Q9UBI1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms