Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.8■□□□□ 0.76
HACD3Q9P035 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.8■□□□□ 0.76
HACD3Q9P035 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.8■□□□□ 0.76
HACD3Q9P035 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HACD3Q9P035 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HACD3Q9P035 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.79■□□□□ 0.76
HACD3Q9P035 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.79■□□□□ 0.76
HACD3Q9P035 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
HACD3Q9P035 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.79■□□□□ 0.76
HACD3Q9P035 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HACD3Q9P035 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HACD3Q9P035 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.79■□□□□ 0.76
HACD3Q9P035 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.79■□□□□ 0.76
HACD3Q9P035 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.79■□□□□ 0.76
HACD3Q9P035 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.79■□□□□ 0.76
HACD3Q9P035 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.79■□□□□ 0.76
HACD3Q9P035 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
HACD3Q9P035 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.79■□□□□ 0.76
HACD3Q9P035 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HACD3Q9P035 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.79■□□□□ 0.76
HACD3Q9P035 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.79■□□□□ 0.76
HACD3Q9P035 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HACD3Q9P035 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.78■□□□□ 0.76
HACD3Q9P035 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.78■□□□□ 0.76
HACD3Q9P035 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HACD3Q9P035 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HACD3Q9P035 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HACD3Q9P035 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HACD3Q9P035 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HACD3Q9P035 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HACD3Q9P035 ESRRAP1-201ENST00000400596 1257 ntBASIC19.78■□□□□ 0.76
HACD3Q9P035 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.78■□□□□ 0.76
HACD3Q9P035 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.78■□□□□ 0.76
HACD3Q9P035 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HACD3Q9P035 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.78■□□□□ 0.76
HACD3Q9P035 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.78■□□□□ 0.76
HACD3Q9P035 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HACD3Q9P035 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.78■□□□□ 0.76
HACD3Q9P035 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HACD3Q9P035 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HACD3Q9P035 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HACD3Q9P035 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.77■□□□□ 0.76
HACD3Q9P035 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HACD3Q9P035 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.77■□□□□ 0.76
HACD3Q9P035 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.77■□□□□ 0.76
HACD3Q9P035 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HACD3Q9P035 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HACD3Q9P035 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.77■□□□□ 0.75
HACD3Q9P035 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.77■□□□□ 0.75
HACD3Q9P035 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HACD3Q9P035 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HACD3Q9P035 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.77■□□□□ 0.75
HACD3Q9P035 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HACD3Q9P035 AFG3L1P-217ENST00000557444 2447 ntBASIC19.76■□□□□ 0.75
HACD3Q9P035 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HACD3Q9P035 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.76■□□□□ 0.75
HACD3Q9P035 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HACD3Q9P035 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HACD3Q9P035 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms