Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 AC112907.3-201ENST00000577781 2400 ntBASIC18.41■□□□□ 0.54
KLHL1Q9NR64 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KLHL1Q9NR64 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 SNORA78-201ENST00000459373 127 ntBASIC18.4■□□□□ 0.54
KLHL1Q9NR64 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KLHL1Q9NR64 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KLHL1Q9NR64 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 AC092720.2-201ENST00000602388 1665 ntBASIC18.39■□□□□ 0.53
KLHL1Q9NR64 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 AC124283.5-201ENST00000624661 1809 ntBASIC18.39■□□□□ 0.53
KLHL1Q9NR64 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KLHL1Q9NR64 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 PRKY-204ENST00000533551 1019 ntBASIC18.38■□□□□ 0.53
KLHL1Q9NR64 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
KLHL1Q9NR64 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.37■□□□□ 0.53
KLHL1Q9NR64 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms