Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 NOC2LP1-202ENST00000452600 2235 ntBASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 PLK5-205ENST00000642079 1969 ntBASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 AC087633.2-202ENST00000565166 1439 ntBASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.77■□□□□ 0.6
TIMMDC1Q9NPL8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TIMMDC1Q9NPL8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.77■□□□□ 0.59
TIMMDC1Q9NPL8 AC079598.2-202ENST00000546624 1451 ntBASIC18.77■□□□□ 0.59
TIMMDC1Q9NPL8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TIMMDC1Q9NPL8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TIMMDC1Q9NPL8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 AC005332.7-201ENST00000614046 2005 ntBASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 POU5F1P3-201ENST00000428824 1078 ntBASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMMDC1Q9NPL8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 AC120498.9-201ENST00000339021 3867 ntBASIC18.75■□□□□ 0.59
TIMMDC1Q9NPL8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TIMMDC1Q9NPL8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TIMMDC1Q9NPL8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TIMMDC1Q9NPL8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TIMMDC1Q9NPL8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.74■□□□□ 0.59
TIMMDC1Q9NPL8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TIMMDC1Q9NPL8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.74■□□□□ 0.59
TIMMDC1Q9NPL8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms