Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A3Q9H7F0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATP13A3Q9H7F0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A3Q9H7F0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP13A3Q9H7F0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A3Q9H7F0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP13A3Q9H7F0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 AC008550.1-201ENST00000511500 884 ntBASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP13A3Q9H7F0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 MIR718-201ENST00000390190 70 ntBASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 AC007952.6-201ENST00000573168 2673 ntBASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 AC003957.1-201ENST00000625108 2673 ntBASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.79■□□□□ 0.76
ATP13A3Q9H7F0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 HTR7P1-201ENST00000538670 1336 ntBASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 AL353807.1-201ENST00000427475 662 ntBASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 AC093827.2-201ENST00000512654 315 ntBASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ATP13A3Q9H7F0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ATP13A3Q9H7F0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms