Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCNX3Q9H6A9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCNX3Q9H6A9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCNX3Q9H6A9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.76■□□□□ 0.43
PCNX3Q9H6A9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 AC007952.6-201ENST00000573168 2673 ntBASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 AC003957.1-201ENST00000625108 2673 ntBASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.75■□□□□ 0.43
PCNX3Q9H6A9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 AC008550.1-201ENST00000511500 884 ntBASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 TREX1-205ENST00000625293 1783 ntBASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.74■□□□□ 0.43
PCNX3Q9H6A9 PRKY-204ENST00000533551 1019 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms