Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 TREX1-205ENST00000625293 1783 ntBASIC19.88■□□□□ 0.77
POLR1EQ9GZS1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 C1QBPP2-201ENST00000528754 825 ntBASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 AC004264.1-201ENST00000608354 794 ntBASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR1EQ9GZS1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 AC133681.1-201ENST00000465482 601 ntBASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 KRT18P16-201ENST00000510337 1294 ntBASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 AC124016.1-201ENST00000609552 612 ntBASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1EQ9GZS1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
POLR1EQ9GZS1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 PRORSD1P-201ENST00000295112 541 ntBASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms