Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 REXO1L10P-201ENST00000615707 1290 ntBASIC20.05■□□□□ 0.8
CIPCQ9C0C6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CIPCQ9C0C6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CIPCQ9C0C6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 AL512408.1-201ENST00000569378 2000 ntBASIC20.03■□□□□ 0.8
CIPCQ9C0C6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 KRT18P16-201ENST00000510337 1294 ntBASIC20.03■□□□□ 0.8
CIPCQ9C0C6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.03■□□□□ 0.8
CIPCQ9C0C6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 MMP23A-201ENST00000234610 1017 ntBASIC20.02■□□□□ 0.8
CIPCQ9C0C6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 UNC93B2-201ENST00000285383 730 ntBASIC20.02■□□□□ 0.8
CIPCQ9C0C6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 RBM17P1-201ENST00000453646 1190 ntBASIC20.02■□□□□ 0.8
CIPCQ9C0C6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CIPCQ9C0C6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CIPCQ9C0C6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CIPCQ9C0C6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CIPCQ9C0C6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CIPCQ9C0C6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CIPCQ9C0C6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CIPCQ9C0C6 AC073130.3-201ENST00000624389 2278 ntBASIC20.01■□□□□ 0.79
CIPCQ9C0C6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms