Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCM2Q9BSQ5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 TUBB8P6-201ENST00000436895 1288 ntBASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 KRT18P16-201ENST00000510337 1294 ntBASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCM2Q9BSQ5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.27■□□□□ 0.67
CCM2Q9BSQ5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCM2Q9BSQ5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCM2Q9BSQ5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCM2Q9BSQ5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCM2Q9BSQ5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCM2Q9BSQ5 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.27■□□□□ 0.67
CCM2Q9BSQ5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.27■□□□□ 0.67
CCM2Q9BSQ5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 KRT16P5-201ENST00000455284 522 ntBASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 AP006294.2-201ENST00000641667 209 ntBASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.26■□□□□ 0.67
CCM2Q9BSQ5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CCM2Q9BSQ5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
CCM2Q9BSQ5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms