Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXB1Q99853 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXB1Q99853 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXB1Q99853 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.25■□□□□ 0.35
FOXB1Q99853 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.25■□□□□ 0.35
FOXB1Q99853 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.25■□□□□ 0.35
FOXB1Q99853 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXB1Q99853 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXB1Q99853 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXB1Q99853 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXB1Q99853 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXB1Q99853 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXB1Q99853 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXB1Q99853 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXB1Q99853 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXB1Q99853 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
FOXB1Q99853 AC239809.2-201ENST00000415381 517 ntBASIC17.24■□□□□ 0.35
FOXB1Q99853 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.24■□□□□ 0.35
FOXB1Q99853 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.24■□□□□ 0.35
FOXB1Q99853 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.24■□□□□ 0.35
FOXB1Q99853 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.24■□□□□ 0.35
FOXB1Q99853 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
FOXB1Q99853 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXB1Q99853 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXB1Q99853 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXB1Q99853 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
FOXB1Q99853 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
FOXB1Q99853 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXB1Q99853 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
FOXB1Q99853 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 KRT18P29-201ENST00000397031 1267 ntBASIC17.23■□□□□ 0.35
FOXB1Q99853 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXB1Q99853 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 RN7SL471P-201ENST00000580476 299 ntBASIC17.23■□□□□ 0.35
FOXB1Q99853 ITM2C-210ENST00000620962 501 ntBASIC17.23■□□□□ 0.35
FOXB1Q99853 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 AL023875.1-201ENST00000640777 796 ntBASIC17.23■□□□□ 0.35
FOXB1Q99853 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 NBPF21P-201ENST00000425093 1451 ntBASIC17.23■□□□□ 0.35
FOXB1Q99853 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXB1Q99853 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXB1Q99853 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXB1Q99853 TREX1-205ENST00000625293 1783 ntBASIC17.23■□□□□ 0.35
FOXB1Q99853 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
FOXB1Q99853 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
FOXB1Q99853 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FOXB1Q99853 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXB1Q99853 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXB1Q99853 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXB1Q99853 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXB1Q99853 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXB1Q99853 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXB1Q99853 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms