Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.21■□□□□ 0.83
CSPG4P5Q96PW8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 ESRRAP1-201ENST00000400596 1257 ntBASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 AC233263.1-201ENST00000578059 224 ntBASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 AC069544.1-201ENST00000609399 999 ntBASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 Z82202.1-201ENST00000623446 1880 ntBASIC20.2■□□□□ 0.82
CSPG4P5Q96PW8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CSPG4P5Q96PW8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 KRT17P3-201ENST00000420566 1262 ntBASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 CD99P1-205ENST00000527459 561 ntBASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 AC005332.7-201ENST00000614046 2005 ntBASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSPG4P5Q96PW8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CSPG4P5Q96PW8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CSPG4P5Q96PW8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSPG4P5Q96PW8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.17■□□□□ 0.82
CSPG4P5Q96PW8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSPG4P5Q96PW8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSPG4P5Q96PW8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSPG4P5Q96PW8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CSPG4P5Q96PW8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms